Gm54387 Gene Detail

Summary

• Symbol
  Gm54387
• Name
  predicted gene, 54387

• Feature Type
  snoRNA gene
• IDs
  MGI:6845254
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:38027825-38027953 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845254	snoRNA gene	Chr16:38027825-38027953 (-)
129S1/SvImJ	ENSMUSG00200029972	snoRNA gene	Chr16:34963903-34964031 (-)
A/J	ENSMUSG00195011407	snoRNA gene	Chr16:34508720-34508848 (-)
AKR/J	ENSMUSG00220029481	snoRNA gene	Chr16:34896801-34896929 (-)
BALB/cJ	ENSMUSG00180013205	snoRNA gene	Chr16:34724253-34724381 (-)
C3H/HeJ	ENSMUSG00175032478	snoRNA gene	Chr16:34950831-34950959 (-)
C57BL/6NJ	ENSMUSG00215023225	snoRNA gene	Chr16:34799623-34799751 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031865	snoRNA gene	Chr16:35256859-35256987 (-)
CBA/J	ENSMUSG00210028473	snoRNA gene	Chr16:35007908-35008036 (-)
DBA/2J	ENSMUSG00185024934	snoRNA gene	Chr16:34910878-34911006 (-)
FVB/NJ	ENSMUSG00205027053	snoRNA gene	Chr16:34884902-34885030 (-)
JF1/MsJ	ENSUMUG00000038063	snoRNA gene	Chr16:35154060-35154188 (-)
LP/J	ENSMUSG00230033013	snoRNA gene	Chr16:37483051-37483179 (-)
NOD/ShiLtJ	ENSMUSG00190023456	snoRNA gene	Chr16:35027858-35027986 (-)
NZO/HlLtJ	ENSMUSG00225028878	snoRNA gene	Chr16:40582371-40582499 (-)
PWK/PhJ	ENSLUMG00010031048	snoRNA gene	Chr16:35054314-35054442 (-)
SPRET/EiJ	ENSMSPG00010018552	snoRNA gene	Chr16:35021591-35021719 (-)
WSB/EiJ	ENSIUOG00005026973	snoRNA gene	Chr16:35109986-35110114 (-)

Homology

• Gene Tree
  Gm54387
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076009 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076009	Ensembl Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	ENSMUST00020183206	Ensembl | MGI Sequence Detail	129	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;