Gm54386 Gene Detail

Summary

• Symbol
  Gm54386
• Name
  predicted gene, 54386

• Feature Type
  miRNA gene
• IDs
  MGI:6845252
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:24691659-24691779 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845252	miRNA gene	Chr18:24691659-24691779 (+)
129S1/SvImJ	ENSMUSG00200016268	miRNA gene	Chr18:21689101-21689221 (+)
A/J	ENSMUSG00195002457	miRNA gene	Chr18:21853871-21853991 (+)
AKR/J	ENSMUSG00220011433	miRNA gene	Chr18:21843148-21843268 (+)
BALB/cJ	ENSMUSG00180003519	miRNA gene	Chr18:22297004-22297124 (+)
C3H/HeJ	ENSMUSG00175024104	miRNA gene	Chr18:21817755-21817875 (+)
C57BL/6NJ	ENSMUSG00215025063	miRNA gene	Chr18:21548778-21548898 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210016184	miRNA gene	Chr18:21844871-21844991 (+)
DBA/2J	ENSMUSG00185022903	miRNA gene	Chr18:21792889-21793009 (+)
FVB/NJ	ENSMUSG00205024052	miRNA gene	Chr18:21518257-21518377 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230006253	miRNA gene	Chr18:23884975-23885095 (+)
NOD/ShiLtJ	ENSMUSG00190007089	miRNA gene	Chr18:21604598-21604718 (+)
NZO/HlLtJ	ENSMUSG00225025698	miRNA gene	Chr18:23841033-23841153 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010022332	miRNA gene	Chr18:22004396-22004512 (+)
WSB/EiJ	ENSIUOG00005002739	miRNA gene	Chr18:21625176-21625302 (+)

Homology

• Gene Tree
  Gm54386
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002075893 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075893	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020182227	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;