Gm54382 Gene Detail

Summary

• Symbol
  Gm54382
• Name
  predicted gene, 54382

• Feature Type
  rRNA gene
• IDs
  MGI:6845244
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:13787212-13787321 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845244	rRNA gene	Chr16:13787212-13787321 (-)
129S1/SvImJ	ENSMUSG00200046623	rRNA gene	Chr16:10770023-10770132 (-)
A/J	ENSMUSG00195037406	rRNA gene	Chr16:10335003-10335112 (-)
AKR/J	ENSMUSG00220047098	rRNA gene	Chr16:10631889-10631998 (-)
BALB/cJ	ENSMUSG00180040416	rRNA gene	Chr16:10577395-10577504 (-)
C3H/HeJ	ENSMUSG00175051564	rRNA gene	Chr16:10743506-10743615 (-)
C57BL/6NJ	ENSMUSG00215043014	rRNA gene	Chr16:10452180-10452289 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045493	rRNA gene	Chr16:10627143-10627252 (-)
CBA/J	ENSMUSG00210047460	rRNA gene	Chr16:10760472-10760581 (-)
DBA/2J	ENSMUSG00185036483	rRNA gene	Chr16:10705991-10706100 (-)
FVB/NJ	ENSMUSG00205047934	rRNA gene	Chr16:10692013-10692122 (-)
JF1/MsJ	ENSUMUG00000052817	rRNA gene	Chr16:10799842-10799951 (-)
LP/J	ENSMUSG00230046243	rRNA gene	Chr16:13265539-13265648 (-)
NOD/ShiLtJ	ENSMUSG00190048990	rRNA gene	Chr16:10826904-10827013 (-)
NZO/HlLtJ	ENSMUSG00225032307	rRNA gene	Chr16:16510791-16510900 (-)
PWK/PhJ	ENSLUMG00010049573	rRNA gene	Chr16:10663739-10663848 (-)
SPRET/EiJ	ENSMSPG00010046701	rRNA gene	Chr16:10651053-10651162 (-)
WSB/EiJ	ENSIUOG00005043548	rRNA gene	Chr16:10779903-10780012 (-)

Homology

• Gene Tree
  Gm54382
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076461 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076461	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182278	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;