Gm54381 Gene Detail

Summary

• Symbol
  Gm54381
• Name
  predicted gene, 54381

• Feature Type
  miRNA gene
• IDs
  MGI:6845242
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:35644770-35644906 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845242	miRNA gene	ChrX:35644770-35644906 (-)
129S1/SvImJ	ENSMUSG00200015685	miRNA gene	ChrX:19752560-19752696 (-)
A/J	ENSMUSG00195025467	miRNA gene	ChrX:22424638-22424774 (-)
AKR/J	ENSMUSG00220018408	miRNA gene	ChrX:19536883-19537019 (-)
BALB/cJ	ENSMUSG00180024001	miRNA gene	ChrX:19982972-19983108 (-)
C3H/HeJ	ENSMUSG00175024749	miRNA gene	ChrX:23125166-23125302 (-)
C57BL/6NJ	ENSMUSG00215025180	miRNA gene	ChrX:20176963-20177099 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034220	miRNA gene	ChrX:22058468-22058604 (-)
CBA/J	ENSMUSG00210035745	miRNA gene	ChrX:20418929-20419065 (-)
DBA/2J	ENSMUSG00185024633	miRNA gene	ChrX:31001973-31002109 (-)
FVB/NJ	ENSMUSG00205023931	miRNA gene	ChrX:19101304-19101440 (-)
JF1/MsJ	ENSUMUG00000029687	miRNA gene	ChrX:50130731-50130871 (-)
LP/J	ENSMUSG00230014568	miRNA gene	ChrX:37494283-37494419 (-)
NOD/ShiLtJ	ENSMUSG00190029456	miRNA gene	ChrX:19691574-19691710 (-)
NZO/HlLtJ	ENSMUSG00225039638	miRNA gene	ChrX:42700659-42700795 (-)
PWK/PhJ	ENSLUMG00010016791	miRNA gene	ChrX:19839044-19839196 (-)
SPRET/EiJ	ENSMSPG00010018739	miRNA gene	ChrX:21059388-21059515 (-)
WSB/EiJ	ENSIUOG00005040046	miRNA gene	ChrX:20611992-20612128 (-)

Homology

• Gene Tree
  Gm54381
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075949 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075949	Ensembl Gene Model | MGI Sequence Detail	137	C57BL/6J
transcript	ENSMUST00020182508	Ensembl | MGI Sequence Detail	137	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;