Gm54378 Gene Detail

Summary

• Symbol
  Gm54378
• Name
  predicted gene, 54378

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845236
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:59871136-59871429 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845236	unclassified non-coding RNA gene	Chr18:59871136-59871429 (-)
129S1/SvImJ	ENSMUSG00200034730	unclassified non-coding RNA gene	Chr18:56985753-56986046 (-)
A/J	ENSMUSG00195005541	unclassified non-coding RNA gene	Chr18:57095697-57095990 (-)
AKR/J	ENSMUSG00220016532	unclassified non-coding RNA gene	Chr18:57070500-57070793 (-)
BALB/cJ	ENSMUSG00180012970	unclassified non-coding RNA gene	Chr18:57667347-57667640 (-)
C3H/HeJ	ENSMUSG00175036406	unclassified non-coding RNA gene	Chr18:57283446-57283739 (-)
C57BL/6NJ	ENSMUSG00215039904	unclassified non-coding RNA gene	Chr18:56603256-56603549 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027446	unclassified non-coding RNA gene	Chr18:56441785-56442078 (-)
CBA/J	ENSMUSG00210032677	unclassified non-coding RNA gene	Chr18:57231609-57231902 (-)
DBA/2J	ENSMUSG00185016092	unclassified non-coding RNA gene	Chr18:57130665-57130958 (-)
FVB/NJ	ENSMUSG00205017985	unclassified non-coding RNA gene	Chr18:56483760-56484053 (-)
JF1/MsJ	ENSUMUG00000037766	unclassified non-coding RNA gene	Chr18:56998700-56998993 (-)
LP/J	ENSMUSG00230012181	unclassified non-coding RNA gene	Chr18:59145465-59145758 (-)
NOD/ShiLtJ	ENSMUSG00190033313	unclassified non-coding RNA gene	Chr18:56875408-56875701 (-)
NZO/HlLtJ	ENSMUSG00225035679	unclassified non-coding RNA gene	Chr18:58990259-58990552 (-)
PWK/PhJ	ENSLUMG00010008472	unclassified non-coding RNA gene	Chr18:57134828-57135121 (-)
SPRET/EiJ	ENSMSPG00010019389	unclassified non-coding RNA gene	Chr18:57583494-57583786 (-)
WSB/EiJ	ENSIUOG00005009516	unclassified non-coding RNA gene	Chr18:56758560-56758853 (-)

Homology

• Gene Tree
  Gm54378
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076257 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076257	Ensembl Gene Model | MGI Sequence Detail	294	C57BL/6J
transcript	ENSMUST00020182749	Ensembl | MGI Sequence Detail	294	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;