Gm54375 Gene Detail

Summary

• Symbol
  Gm54375
• Name
  predicted gene, 54375

• Feature Type
  rRNA gene
• IDs
  MGI:6845230
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:54713462-54713571 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845230	rRNA gene	Chr12:54713462-54713571 (-)
129S1/SvImJ	ENSMUSG00200030613	rRNA gene	Chr12:46697038-46697147 (-)
A/J	ENSMUSG00195018818	rRNA gene	Chr12:49267196-49267305 (-)
AKR/J	ENSMUSG00220026859	rRNA gene	Chr12:47315532-47315641 (-)
BALB/cJ	ENSMUSG00180006093	rRNA gene	Chr12:48258731-48258840 (-)
C3H/HeJ	ENSMUSG00175011756	rRNA gene	Chr12:51329334-51329443 (-)
C57BL/6NJ	ENSMUSG00215016489	rRNA gene	Chr12:47631252-47631361 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009152	rRNA gene	Chr12:47750442-47750551 (-)
CBA/J	ENSMUSG00210009856	rRNA gene	Chr12:47803624-47803733 (-)
DBA/2J	ENSMUSG00185014564	rRNA gene	Chr12:49749073-49749182 (-)
FVB/NJ	ENSMUSG00205015224	rRNA gene	Chr12:47594773-47594882 (-)
JF1/MsJ	ENSUMUG00000008218	rRNA gene	Chr12:53889166-53889275 (-)
LP/J	ENSMUSG00230017048	rRNA gene	Chr12:56774087-56774196 (-)
NOD/ShiLtJ	ENSMUSG00190017002	rRNA gene	Chr12:46785118-46785227 (-)
NZO/HlLtJ	ENSMUSG00225041293	rRNA gene	Chr12:58918038-58918147 (-)
PWK/PhJ	ENSLUMG00010016756	rRNA gene	Chr12:47937480-47937589 (-)
SPRET/EiJ	ENSMSPG00010016273	rRNA gene	Chr12:49310317-49310426 (-)
WSB/EiJ	ENSIUOG00005003645	rRNA gene	Chr12:47642060-47642169 (-)

Homology

• Gene Tree
  Gm54375
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076888 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076888	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183630	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;