Gm54374 Gene Detail

Summary

• Symbol
  Gm54374
• Name
  predicted gene, 54374

• Feature Type
  snRNA gene
• IDs
  MGI:6845228
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:54287541-54287686 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845228	snRNA gene	Chr12:54287541-54287686 (-)
129S1/SvImJ	ENSMUSG00200031562	snRNA gene	Chr12:46261523-46261668 (-)
A/J	ENSMUSG00195018951	snRNA gene	Chr12:48831463-48831608 (-)
AKR/J	ENSMUSG00220027526	snRNA gene	Chr12:46879822-46879967 (-)
BALB/cJ	ENSMUSG00180006173	snRNA gene	Chr12:47823032-47823177 (-)
C3H/HeJ	ENSMUSG00175011860	snRNA gene	Chr12:50893627-50893772 (-)
C57BL/6NJ	ENSMUSG00215018482	snRNA gene	Chr12:47204283-47204428 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009184	snRNA gene	Chr12:47342031-47342176 (-)
CBA/J	ENSMUSG00210010110	snRNA gene	Chr12:47367904-47368049 (-)
DBA/2J	ENSMUSG00185015246	snRNA gene	Chr12:49322007-49322152 (-)
FVB/NJ	ENSMUSG00205013945	snRNA gene	Chr12:47159238-47159383 (-)
JF1/MsJ	ENSUMUG00000008941	snRNA gene	Chr12:53455214-53455359 (-)
LP/J	ENSMUSG00230017119	snRNA gene	Chr12:56338617-56338762 (-)
NOD/ShiLtJ	ENSMUSG00190016818	snRNA gene	Chr12:46349418-46349563 (-)
NZO/HlLtJ	ENSMUSG00225041279	snRNA gene	Chr12:58491098-58491243 (-)
PWK/PhJ	ENSLUMG00010016512	snRNA gene	Chr12:47520907-47521052 (-)
SPRET/EiJ	ENSMSPG00010016505	snRNA gene	Chr12:48889887-48890033 (-)
WSB/EiJ	ENSIUOG00005003830	snRNA gene	Chr12:47206655-47206800 (-)

Homology

• Gene Tree
  Gm54374
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076688 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076688	Ensembl Gene Model | MGI Sequence Detail	146	C57BL/6J
transcript	ENSMUST00020182318	Ensembl | MGI Sequence Detail	146	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;