Gm54373 Gene Detail

Summary

• Symbol
  Gm54373
• Name
  predicted gene, 54373

• Feature Type
  miRNA gene
• IDs
  MGI:6845226
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:57814886-57814981 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845226	miRNA gene	Chr18:57814886-57814981 (+)
129S1/SvImJ	ENSMUSG00200034792	miRNA gene	Chr18:54907599-54907694 (+)
A/J	ENSMUSG00195005760	miRNA gene	Chr18:55032288-55032383 (+)
AKR/J	ENSMUSG00220016601	miRNA gene	Chr18:55025490-55025585 (+)
BALB/cJ	ENSMUSG00180013024	miRNA gene	Chr18:55603760-55603855 (+)
C3H/HeJ	ENSMUSG00175036875	miRNA gene	Chr18:55217626-55217721 (+)
C57BL/6NJ	ENSMUSG00215040265	miRNA gene	Chr18:54543528-54543623 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028229	miRNA gene	Chr18:54418472-54418567 (+)
CBA/J	ENSMUSG00210033026	miRNA gene	Chr18:55168170-55168265 (+)
DBA/2J	ENSMUSG00185015973	miRNA gene	Chr18:55069768-55069863 (+)
FVB/NJ	ENSMUSG00205020215	miRNA gene	Chr18:54533598-54533693 (+)
JF1/MsJ	ENSUMUG00000036524	miRNA gene	Chr18:54976950-54977045 (+)
LP/J	ENSMUSG00230012222	miRNA gene	Chr18:57080165-57080260 (+)
NOD/ShiLtJ	ENSMUSG00190033258	miRNA gene	Chr18:54800649-54800744 (+)
NZO/HlLtJ	ENSMUSG00225035708	miRNA gene	Chr18:56944260-56944355 (+)
PWK/PhJ	ENSLUMG00010008499	miRNA gene	Chr18:55100394-55100489 (+)
SPRET/EiJ	ENSMSPG00010019241	miRNA gene	Chr18:55494318-55494368 (+)
WSB/EiJ	ENSIUOG00005009854	miRNA gene	Chr18:54704611-54704706 (+)

Homology

• Gene Tree
  Gm54373
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074848 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074848	Ensembl Gene Model | MGI Sequence Detail	96	C57BL/6J
transcript	ENSMUST00020182937	Ensembl | MGI Sequence Detail	96	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;