Gm54372 Gene Detail

Summary

• Symbol
  Gm54372
• Name
  predicted gene, 54372

• Feature Type
  snRNA gene
• IDs
  MGI:6845224
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:20977504-20977649 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  51 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845224	snRNA gene	Chr18:20977504-20977649 (-)
129S1/SvImJ	ENSMUSG00200020120	snRNA gene	Chr18:17985085-17985233 (-)
A/J	ENSMUSG00195002402	snRNA gene	Chr18:18130285-18130430 (-)
AKR/J	ENSMUSG00220012114	snRNA gene	Chr18:18137239-18137384 (-)
BALB/cJ	ENSMUSG00180004116	snRNA gene	Chr18:18591502-18591647 (-)
C3H/HeJ	ENSMUSG00175004454	snRNA gene	Chr18:18078715-18078860 (-)
C57BL/6NJ	ENSMUSG00215003696	snRNA gene	Chr18:17830475-17830620 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015058	snRNA gene	Chr18:17875433-17875578 (-)
CBA/J	ENSMUSG00210020391	snRNA gene	Chr18:18143203-18143351 (-)
DBA/2J	ENSMUSG00185008497	snRNA gene	Chr18:18100487-18100635 (-)
FVB/NJ	ENSMUSG00205016775	snRNA gene	Chr18:17832759-17832907 (-)
JF1/MsJ	ENSUMUG00000025363	snRNA gene	Chr18:18161292-18161437 (-)
LP/J	ENSMUSG00230006322	snRNA gene	Chr18:20181283-20181431 (-)
NOD/ShiLtJ	ENSMUSG00190017461	snRNA gene	Chr18:17915140-17915288 (-)
NZO/HlLtJ	ENSMUSG00225028233	snRNA gene	Chr18:20104213-20104358 (-)
PWK/PhJ	ENSLUMG00010015904	snRNA gene	Chr18:18349819-18349964 (-)
SPRET/EiJ	ENSMSPG00010004813	snRNA gene	Chr18:18236899-18237044 (-)
WSB/EiJ	ENSIUOG00005019943	snRNA gene	Chr18:17934727-17934875 (-)

Homology

• Gene Tree
  Gm54372
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076630 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076630	Ensembl Gene Model | MGI Sequence Detail	146	C57BL/6J
transcript	ENSMUST00020182548	Ensembl | MGI Sequence Detail	146	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;