Gm54370 Gene Detail

Summary

• Symbol
  Gm54370
• Name
  predicted gene, 54370

• Feature Type
  miRNA gene
• IDs
  MGI:6845220
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:103120577-103120667 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845220	miRNA gene	ChrX:103120577-103120667 (+)
129S1/SvImJ	ENSMUSG00200039403	miRNA gene	ChrX:84882169-84882259 (+)
A/J	ENSMUSG00195042991	miRNA gene	ChrX:88642105-88642195 (+)
AKR/J	ENSMUSG00220040292	miRNA gene	ChrX:83309111-83309201 (+)
BALB/cJ	ENSMUSG00180044607	miRNA gene	ChrX:85314221-85314311 (+)
C3H/HeJ	ENSMUSG00175044530	miRNA gene	ChrX:88887016-88887106 (+)
C57BL/6NJ	ENSMUSG00215046772	miRNA gene	ChrX:85498640-85498730 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042518	miRNA gene	ChrX:86357093-86357183 (+)
CBA/J	ENSMUSG00210046356	miRNA gene	ChrX:85777826-85777916 (+)
DBA/2J	ENSMUSG00185044175	miRNA gene	ChrX:98221592-98221682 (+)
FVB/NJ	ENSMUSG00205037074	miRNA gene	ChrX:84849072-84849162 (+)
JF1/MsJ	ENSUMUG00000043683	miRNA gene	ChrX:118824686-118824776 (+)
LP/J	ENSMUSG00230043004	miRNA gene	ChrX:104915336-104915426 (+)
NOD/ShiLtJ	ENSMUSG00190038514	miRNA gene	ChrX:84946572-84946662 (+)
NZO/HlLtJ	ENSMUSG00225046106	miRNA gene	ChrX:110042511-110042601 (+)
PWK/PhJ	ENSLUMG00010041070	miRNA gene	ChrX:84147094-84147184 (+)
SPRET/EiJ	ENSMSPG00010039970	miRNA gene	ChrX:88343428-88343518 (+)
WSB/EiJ	ENSIUOG00005043630	miRNA gene	ChrX:85445983-85446073 (+)

Homology

• Gene Tree
  Gm54370
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076103 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076103	Ensembl Gene Model | MGI Sequence Detail	91	C57BL/6J
transcript	ENSMUST00020181855	Ensembl | MGI Sequence Detail	91	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;