Gm54369 Gene Detail

Summary

• Symbol
  Gm54369
• Name
  predicted gene, 54369

• Feature Type
  miRNA gene
• IDs
  MGI:6845218
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:109695255-109695377 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845218	miRNA gene	Chr12:109695255-109695377 (+)
129S1/SvImJ	ENSMUSG00200028491	miRNA gene	Chr12:101469022-101469144 (+)
A/J	ENSMUSG00195048252	miRNA gene	Chr12:104000932-104001054 (+)
AKR/J	ENSMUSG00220041220	miRNA gene	Chr12:101883202-101883324 (+)
BALB/cJ	ENSMUSG00180048779	miRNA gene	Chr12:103232179-103232301 (+)
C3H/HeJ	ENSMUSG00175048017	miRNA gene	Chr12:105811165-105811287 (+)
C57BL/6NJ	ENSMUSG00215047508	miRNA gene	Chr12:102505122-102505244 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019847	miRNA gene	Chr12:101983455-101983577 (+)
CBA/J	ENSMUSG00210031342	miRNA gene	Chr12:102872622-102872744 (+)
DBA/2J	ENSMUSG00185034190	miRNA gene	Chr12:104691171-104691293 (+)
FVB/NJ	ENSMUSG00205038553	miRNA gene	Chr12:101917034-101917156 (+)
JF1/MsJ	ENSUMUG00000029055	miRNA gene	Chr12:109449301-109449423 (+)
LP/J	ENSMUSG00230030827	miRNA gene	Chr12:111733902-111734024 (+)
NOD/ShiLtJ	ENSMUSG00190041305	miRNA gene	Chr12:83305994-83306116 (-)
NZO/HlLtJ	ENSMUSG00225038421	miRNA gene	Chr12:113492780-113492902 (+)
PWK/PhJ	ENSLUMG00010044866	miRNA gene	Chr12:102921814-102921936 (+)
SPRET/EiJ	ENSMSPG00010021416	miRNA gene	Chr12:105204860-105204982 (+)
WSB/EiJ	ENSIUOG00005010320	miRNA gene	Chr12:101914463-101914585 (+)

Homology

• Gene Tree
  Gm54369
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075058 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075058	Ensembl Gene Model | MGI Sequence Detail	123	C57BL/6J
transcript	ENSMUST00020182176	Ensembl | MGI Sequence Detail	123	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;