Gm54368 Gene Detail

Summary

• Symbol
  Gm54368
• Name
  predicted gene, 54368

• Feature Type
  miRNA gene
• IDs
  MGI:6845216
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:109694542-109694656 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845216	miRNA gene	Chr12:109694542-109694656 (-)
129S1/SvImJ	ENSMUSG00200029706	miRNA gene	Chr12:101468309-101468423 (-)
A/J	ENSMUSG00195044756	miRNA gene	Chr12:104000219-104000333 (-)
AKR/J	ENSMUSG00220039660	miRNA gene	Chr12:101882489-101882603 (-)
BALB/cJ	ENSMUSG00180048442	miRNA gene	Chr12:103231466-103231580 (-)
C3H/HeJ	ENSMUSG00175049877	miRNA gene	Chr12:105810453-105810567 (-)
C57BL/6NJ	ENSMUSG00215047392	miRNA gene	Chr12:102504409-102504523 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019579	miRNA gene	Chr12:101982710-101982824 (-)
CBA/J	ENSMUSG00210040247	miRNA gene	Chr12:102871910-102872024 (-)
DBA/2J	ENSMUSG00185028558	miRNA gene	Chr12:104690458-104690572 (-)
FVB/NJ	ENSMUSG00205046573	miRNA gene	Chr12:101916320-101916434 (-)
JF1/MsJ	ENSUMUG00000034346	miRNA gene	Chr12:109448569-109448683 (-)
LP/J	ENSMUSG00230030756	miRNA gene	Chr12:111733189-111733303 (-)
NOD/ShiLtJ	ENSMUSG00190033392	miRNA gene	Chr12:83306735-83306849 (+)
NZO/HlLtJ	ENSMUSG00225038340	miRNA gene	Chr12:113492067-113492181 (-)
PWK/PhJ	ENSLUMG00010045419	miRNA gene	Chr12:102921077-102921191 (-)
SPRET/EiJ	ENSMSPG00010019243	miRNA gene	Chr12:105204117-105204231 (-)
WSB/EiJ	ENSIUOG00005008897	miRNA gene	Chr12:101913734-101913848 (-)

Homology

• Gene Tree
  Gm54368
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076459 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076459	Ensembl Gene Model | MGI Sequence Detail	115	C57BL/6J
transcript	ENSMUST00020182324	Ensembl | MGI Sequence Detail	115	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;