Gm54362 Gene Detail

Summary

• Symbol
  Gm54362
• Name
  predicted gene, 54362

• Feature Type
  miRNA gene
• IDs
  MGI:6845204
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:56354906-56355090 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845204	miRNA gene	Chr18:56354906-56355090 (+)
129S1/SvImJ	ENSMUSG00200034389	miRNA gene	Chr18:53457661-53457845 (+)
A/J	ENSMUSG00195005647	miRNA gene	Chr18:53580557-53580741 (+)
AKR/J	ENSMUSG00220016476	miRNA gene	Chr18:53570656-53570840 (+)
BALB/cJ	ENSMUSG00180012672	miRNA gene	Chr18:54151524-54151708 (+)
C3H/HeJ	ENSMUSG00175037194	miRNA gene	Chr18:53759112-53759296 (+)
C57BL/6NJ	ENSMUSG00215040184	miRNA gene	Chr18:53083211-53083395 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028107	miRNA gene	Chr18:52961142-52961326 (+)
CBA/J	ENSMUSG00210033998	miRNA gene	Chr18:53711365-53711549 (+)
DBA/2J	ENSMUSG00185016134	miRNA gene	Chr18:53611192-53611376 (+)
FVB/NJ	ENSMUSG00205019207	miRNA gene	Chr18:53076918-53077102 (+)
JF1/MsJ	ENSUMUG00000035848	miRNA gene	Chr18:53513084-53513268 (+)
LP/J	ENSMUSG00230012209	miRNA gene	Chr18:55631182-55631366 (+)
NOD/ShiLtJ	ENSMUSG00190034497	miRNA gene	Chr18:53312670-53312854 (+)
NZO/HlLtJ	ENSMUSG00225035687	miRNA gene	Chr18:55492671-55492855 (+)
PWK/PhJ	ENSLUMG00010008727	miRNA gene	Chr18:53649114-53649298 (+)
SPRET/EiJ	ENSMSPG00010018796	miRNA gene	Chr18:54027114-54027297 (+)
WSB/EiJ	ENSIUOG00005009629	miRNA gene	Chr18:53247763-53247947 (+)

Homology

• Gene Tree
  Gm54362
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm54362
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075430 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075430	Ensembl Gene Model | MGI Sequence Detail	185	C57BL/6J
transcript	ENSMUST00020183223	Ensembl | MGI Sequence Detail	185	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67