Gm54358 Gene Detail

Summary

• Symbol
  Gm54358
• Name
  predicted gene, 54358

• Feature Type
  rRNA gene
• IDs
  MGI:6845196
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:19989942-19990039 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  55 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845196	rRNA gene	Chr18:19989942-19990039 (+)
129S1/SvImJ	ENSMUSG00200019937	rRNA gene	Chr18:17003700-17003797 (+)
A/J	ENSMUSG00195002333	rRNA gene	Chr18:17137955-17138052 (+)
AKR/J	ENSMUSG00220011911	rRNA gene	Chr18:17182617-17182714 (+)
BALB/cJ	ENSMUSG00180004154	rRNA gene	Chr18:17599315-17599412 (+)
C3H/HeJ	ENSMUSG00175004542	rRNA gene	Chr18:17125547-17125644 (+)
C57BL/6NJ	ENSMUSG00215003571	rRNA gene	Chr18:16838166-16838263 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014860	rRNA gene	Chr18:16858364-16858461 (+)
CBA/J	ENSMUSG00210020677	rRNA gene	Chr18:17151704-17151801 (+)
DBA/2J	ENSMUSG00185008389	rRNA gene	Chr18:17106759-17106856 (+)
FVB/NJ	ENSMUSG00205016780	rRNA gene	Chr18:16841448-16841545 (+)
JF1/MsJ	ENSUMUG00000026651	rRNA gene	Chr18:17165302-17165399 (+)
LP/J	ENSMUSG00230012607	rRNA gene	Chr18:19197806-19197903 (+)
NOD/ShiLtJ	ENSMUSG00190017626	rRNA gene	Chr18:16921801-16921898 (+)
NZO/HlLtJ	ENSMUSG00225028344	rRNA gene	Chr18:19114330-19114427 (+)
PWK/PhJ	ENSLUMG00010015796	rRNA gene	Chr18:17343515-17343612 (+)
SPRET/EiJ	ENSMSPG00010004853	rRNA gene	Chr18:17242293-17242390 (+)
WSB/EiJ	ENSIUOG00005019580	rRNA gene	Chr18:17003828-17003925 (+)

Homology

• Gene Tree
  Gm54358
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076979 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076979	Ensembl Gene Model | MGI Sequence Detail	98	C57BL/6J
transcript	ENSMUST00020183341	Ensembl | MGI Sequence Detail	98	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;