Gm53771 Gene Detail

Summary

• Symbol
  Gm53771
• Name
  predicted gene, 53771

• Feature Type
  lncRNA gene
• IDs
  MGI:6722582
  NCBI Gene: 118568024
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:114330054-114336827 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  284 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6722582	lncRNA gene	Chr12:114286646-114336926 (+)
129S1/SvImJ	ENSMUSG00200028417	lncRNA gene	Chr12:106034004-106073680 (+)
A/J	ENSMUSG00195049020	lncRNA gene	Chr12:108788240-108827990 (+)
AKR/J	ENSMUSG00220042640	lncRNA gene	Chr12:106414856-106457021 (+)
BALB/cJ	ENSMUSG00180052101	lncRNA gene	Chr12:108266110-108305786 (+)
C3H/HeJ	ENSMUSG00175047517	lncRNA gene	Chr12:110404666-110446833 (+)
C57BL/6NJ	ENSMUSG00215048883	lncRNA gene	Chr12:107076218-107126729 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042356	lncRNA gene	Chr12:107287407-107327126 (+)
CBA/J	ENSMUSG00210036567	lncRNA gene	Chr12:107481165-107523327 (+)
DBA/2J	ENSMUSG00185032507	lncRNA gene	Chr12:109449347-109489146 (+)
FVB/NJ	ENSMUSG00205045560	lncRNA gene	Chr12:106541688-106581706 (+)
JF1/MsJ	ENSUMUG00000027311	lncRNA gene	Chr12:114083879-114123466 (+)
LP/J	ENSMUSG00230047387	lncRNA gene	Chr12:116339139-116389423 (+)
NOD/ShiLtJ	ENSMUSG00190033356	lncRNA gene	Chr12:105922259-105972547 (+)
NZO/HlLtJ	ENSMUSG00225043254	lncRNA gene	Chr12:118222343-118264512 (+)
PWK/PhJ	ENSLUMG00010049976	lncRNA gene	Chr12:107760611-107812858 (+)
SPRET/EiJ	ENSMSPG00010024865	lncRNA gene	Chr12:110487229-110527146 (+)
WSB/EiJ	ENSIUOG00005043001	lncRNA gene	Chr12:106925297-106965041 (+)

Homology

• Gene Tree
  Gm53771
  

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000121131 (Evidence)
• NCBI Gene
  118568024

Representative Sequences			Length	Strain/Species
genomic	118568024	NCBI Gene Model | MGI Sequence Detail	6774	C57BL/6J
transcript	XR_004937815	RefSeq | MGI Sequence Detail	335	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;