Gm50503 Gene Detail

Summary

• Symbol
  Gm50503
• Name
  predicted gene, 50503

• Feature Type
  lncRNA gene
• IDs
  MGI:6468365
  NCBI Gene: 105245613
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr13:101674447-101677102 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  188 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6468365	lncRNA gene	Chr13:101673962-101677213 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm50503
  

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  1

• Ensembl
  ENSMUSG00000134210 (Evidence)
• NCBI Gene
  105245613

Representative Sequences			Length	Strain/Species
genomic	105245613	NCBI Gene Model | MGI Sequence Detail	2656	C57BL/6J
transcript	NR_168907	RefSeq | MGI Sequence Detail	278	ZRU/MplStud

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm50503:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr123822	Chr13:101674753-101674778 (-)	2,336 bp
Tssr123821	Chr13:101674717-101674742 (-)	2,372 bp