Gm53064 Pseudogene Detail

Summary

• Symbol
  Gm53064
• Name
  53064

• Feature Type
  pseudogene
• IDs
  MGI:6436280
  NCBI Gene: 100504039
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:52688604-52692886 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic

Strain
Comparison

• SNPs within 2kb
  188 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6436280	pseudogene	ChrX:52688604-52693256 (+)
129S1/SvImJ	ENSMUSG00200038488	pseudogene	ChrX:36590372-36594653 (+)
A/J	ENSMUSG00195018141	pseudogene	ChrX:39540953-39586351 (-)
AKR/J	ENSMUSG00220038440	pseudogene	ChrX:36145515-36149800 (+)
BALB/cJ	ENSMUSG00180034998	pseudogene	ChrX:37086048-37090337 (+)
C3H/HeJ	ENSMUSG00175044581	pseudogene	ChrX:40126021-40130308 (+)
C57BL/6NJ	ENSMUSG00215047981	pseudogene	ChrX:37089534-37093818 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039224	pseudogene	ChrX:39058466-39062756 (+)
CBA/J	ENSMUSG00210041490	pseudogene	ChrX:37344112-37348396 (+)
DBA/2J	ENSMUSG00185033646	pseudogene	ChrX:48048156-48052438 (+)
FVB/NJ	ENSMUSG00205030732	pseudogene	ChrX:35672947-35677233 (+)
JF1/MsJ	ENSUMUG00000031182	pseudogene	ChrX:67073085-67077383 (+)
LP/J	ENSMUSG00230029549	pseudogene	ChrX:54595400-54599682 (+)
NOD/ShiLtJ	ENSMUSG00190039400	pseudogene	ChrX:36453684-36457967 (+)
NZO/HlLtJ	ENSMUSG00225043222	pseudogene	ChrX:59772525-59776803 (+)
PWK/PhJ	ENSLUMG00010041621	pseudogene	ChrX:36757460-36761727 (+)
SPRET/EiJ	ENSMSPG00010025925	pseudogene	ChrX:38480882-38485180 (+)
WSB/EiJ	ENSIUOG00005048104	pseudogene	ChrX:37586711-37590998 (+)

Homology

• Gene Tree
  Gm53064
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000071763 (Evidence)
• NCBI Gene
  100504039

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000071763	Ensembl Gene Model | MGI Sequence Detail	4283	C57BL/6J
transcript	ENSMUST00000125315	Ensembl | MGI Sequence Detail	703	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm53064:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr160971	ChrX:52690042-52690077 (+)	1,456 bp