Gm53045 Pseudogene Detail

Summary

• Symbol
  Gm53045
• Name
  predicted gene, 53045

• Feature Type
  pseudogene
• IDs
  MGI:6388939
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:64469771-64477747 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  412 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388939	pseudogene	Chr13:64469771-64477747 (-)
129S1/SvImJ	ENSMUSG00200017061	pseudogene	Chr13:60607780-60608386 (-)
A/J	ENSMUSG00195029123	pseudogene	Chr13:60773978-60774585 (-)
AKR/J	ENSMUSG00220044538	pseudogene	Chr13:59849470-59850076 (-)
BALB/cJ	ENSMUSG00180029015	pseudogene	Chr13:61063793-61064408 (-)
C3H/HeJ	ENSMUSG00175008627	pseudogene	Chr13:60890069-60890679 (-)
C57BL/6NJ	ENSMUSG00215013097	pseudogene	Chr13:60881165-60881900 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011938	pseudogene	Chr13:61262032-61262766 (-)
CBA/J	ENSMUSG00210009627	pseudogene	Chr13:61089541-61090151 (-)
DBA/2J	ENSMUSG00185008804	pseudogene	Chr13:61927478-61928225 (-)
FVB/NJ	ENSMUSG00205045455	pseudogene	Chr13:60062771-60063371 (-)
JF1/MsJ	ENSUMUG00000032636	pseudogene	Chr13:61539162-61539898 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190038038	pseudogene	Chr13:60836754-60837501 (-)
NZO/HlLtJ	ENSMUSG00225048153	pseudogene	Chr13:64988105-64988852 (-)
PWK/PhJ	ENSLUMG00010012646	pseudogene	Chr13:60384393-60385126 (-)
SPRET/EiJ	ENSMSPG00010030801	pseudogene	Chr13:60608801-60609536 (-)
WSB/EiJ	ENSIUOG00005026775	pseudogene	Chr13:59558145-59558751 (-)

Homology

• Gene Tree
  Gm53045
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000118556 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118556	Ensembl Gene Model | MGI Sequence Detail	7977	C57BL/6J
transcript	ENSMUST00000238814	Ensembl | MGI Sequence Detail	1701	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;