Gm53043 Pseudogene Detail

Summary

• Symbol
  Gm53043
• Name
  predicted gene, 53043

• Feature Type
  pseudogene
• IDs
  MGI:6388937
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:59055708-59056132 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388937	pseudogene	Chr10:59055708-59056132 (-)
129S1/SvImJ	ENSMUSG00200029868	pseudogene	Chr10:55724832-55725256 (-)
A/J	ENSMUSG00195028997	pseudogene	Chr10:56019237-56019661 (-)
AKR/J	ENSMUSG00220042642	pseudogene	Chr10:55724063-55724487 (-)
BALB/cJ	ENSMUSG00180027694	pseudogene	Chr10:56074298-56074722 (-)
C3H/HeJ	ENSMUSG00175026529	pseudogene	Chr10:55932123-55932547 (-)
C57BL/6NJ	ENSMUSG00215033802	pseudogene	Chr10:55672405-55672829 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029790	pseudogene	Chr10:55718540-55718965 (-)
CBA/J	ENSMUSG00210038950	pseudogene	Chr10:55810471-55810895 (-)
DBA/2J	ENSMUSG00185043142	pseudogene	Chr10:56154161-56154585 (-)
FVB/NJ	ENSMUSG00205034780	pseudogene	Chr10:55824251-55824675 (-)
JF1/MsJ	ENSUMUG00000022320	pseudogene	Chr10:57386637-57387061 (-)
LP/J	ENSMUSG00230023887	pseudogene	Chr10:57955218-57955642 (-)
NOD/ShiLtJ	ENSMUSG00190040771	pseudogene	Chr10:56137804-56138228 (-)
NZO/HlLtJ	ENSMUSG00225045752	pseudogene	Chr10:62241392-62241816 (-)
PWK/PhJ	ENSLUMG00010023793	pseudogene	Chr10:55750450-55750874 (-)
SPRET/EiJ	ENSMSPG00010026902	pseudogene	Chr10:57311828-57312252 (-)
WSB/EiJ	ENSIUOG00005042662	pseudogene	Chr10:55700295-55700719 (-)

Homology

• Gene Tree
  Gm53043
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118557 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118557	Ensembl Gene Model | MGI Sequence Detail	425	C57BL/6J
transcript	ENSMUST00000239006	Ensembl | MGI Sequence Detail	425	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;