Gm53037 Pseudogene Detail

Summary

• Symbol
  Gm53037
• Name
  predicted gene, 53037

• Feature Type
  pseudogene
• IDs
  MGI:6388930
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:7018913-7018996 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388930	pseudogene	Chr7:7018913-7018996 (+)
129S1/SvImJ	ENSMUSG00200042824	pseudogene	Chr7:3892988-3893071 (+)
A/J	ENSMUSG00195052884	pseudogene	Chr7:3744179-3744262 (+)
AKR/J	ENSMUSG00220031289	pseudogene	Chr7:1400459-1400542 (+)
BALB/cJ	ENSMUSG00180050542	pseudogene	Chr7:3699438-3699521 (+)
C3H/HeJ	ENSMUSG00175048246	pseudogene	Chr7:3631019-3631102 (+)
C57BL/6NJ	ENSMUSG00215044075	pseudogene	Chr7:3776857-3776940 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030037	pseudogene	Chr7:3837740-3837823 (+)
CBA/J	ENSMUSG00210047991	pseudogene	Chr7:3655549-3655632 (+)
DBA/2J	ENSMUSG00185043885	pseudogene	Chr7:3891448-3891531 (+)
FVB/NJ	ENSMUSG00205049254	pseudogene	Chr7:3517990-3518073 (+)
JF1/MsJ	ENSUMUG00000055437	pseudogene	Chr7:3962875-3962958 (+)
LP/J	ENSMUSG00230041737	pseudogene	Chr7:6898508-6898591 (+)
NOD/ShiLtJ	ENSMUSG00190050226	pseudogene	Chr7:3777763-3777846 (+)
NZO/HlLtJ	ENSMUSG00225022507	pseudogene	Chr7:4742114-4742197 (+)
PWK/PhJ	ENSLUMG00010049856	pseudogene	Chr7:7449496-7449579 (+)
SPRET/EiJ	ENSMSPG00010050154	pseudogene	Chr7:3497685-3497768 (+)
WSB/EiJ	ENSIUOG00005052335	pseudogene	Chr7:3660440-3660523 (+)

Homology

• Gene Tree
  Gm53037
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118617 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118617	Ensembl Gene Model | MGI Sequence Detail	84	C57BL/6J
transcript	ENSMUST00000239225	Ensembl | MGI Sequence Detail	84	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;