Gm53036 Pseudogene Detail

Summary

• Symbol
  Gm53036
• Name
  predicted gene, 53036

• Feature Type
  pseudogene
• IDs
  MGI:6388929
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:100450283-100450434 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388929	pseudogene	Chr11:100450283-100450434 (+)
129S1/SvImJ	ENSMUSG00200053215	pseudogene	Chr11:97720312-97720463 (+)
A/J	ENSMUSG00195053424	pseudogene	Chr11:97418636-97418787 (+)
AKR/J	ENSMUSG00220052439	pseudogene	Chr11:97654377-97654528 (+)
BALB/cJ	ENSMUSG00180052193	pseudogene	Chr11:97782169-97782320 (+)
C3H/HeJ	ENSMUSG00175052036	pseudogene	Chr11:97693859-97694010 (+)
C57BL/6NJ	ENSMUSG00215054491	pseudogene	Chr11:97269330-97269481 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050934	pseudogene	Chr11:97199184-97199335 (+)
CBA/J	ENSMUSG00210053732	pseudogene	Chr11:97415493-97415644 (+)
DBA/2J	ENSMUSG00185052410	pseudogene	Chr11:97743750-97743901 (+)
FVB/NJ	ENSMUSG00205051225	pseudogene	Chr11:97600255-97600406 (+)
JF1/MsJ	ENSUMUG00000055774	pseudogene	Chr11:97995047-97995198 (+)
LP/J	ENSMUSG00230051256	pseudogene	Chr11:98796467-98796618 (+)
NOD/ShiLtJ	ENSMUSG00190052007	pseudogene	Chr11:97779796-97779947 (+)
NZO/HlLtJ	ENSMUSG00225052677	pseudogene	Chr11:100832291-100832442 (+)
PWK/PhJ	ENSLUMG00010052032	pseudogene	Chr11:97551080-97551231 (+)
SPRET/EiJ	ENSMSPG00010051167	pseudogene	Chr11:98038298-98038449 (+)
WSB/EiJ	ENSIUOG00005051265	pseudogene	Chr11:97544815-97544966 (+)

Homology

• Gene Tree
  Gm53036
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118532 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118532	Ensembl Gene Model | MGI Sequence Detail	152	C57BL/6J
transcript	ENSMUST00000239071	Ensembl | MGI Sequence Detail	152	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;