Gm53034 Pseudogene Detail

Summary

• Symbol
  Gm53034
• Name
  predicted gene, 53034

• Feature Type
  pseudogene
• IDs
  MGI:6388927
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:100863534-100863674 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388927	pseudogene	Chr12:100863534-100863674 (+)
129S1/SvImJ	ENSMUSG00200028917	pseudogene	Chr12:92631952-92632092 (+)
A/J	ENSMUSG00195021351	pseudogene	Chr12:95193333-95193473 (+)
AKR/J	ENSMUSG00220044558	pseudogene	Chr12:93099778-93099918 (+)
BALB/cJ	ENSMUSG00180037090	pseudogene	Chr12:94349943-94350083 (+)
C3H/HeJ	ENSMUSG00175036469	pseudogene	Chr12:97006275-97006415 (+)
C57BL/6NJ	ENSMUSG00215041440	pseudogene	Chr12:93661613-93661753 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020703	pseudogene	Chr12:93300144-93300284 (+)
CBA/J	ENSMUSG00210014874	pseudogene	Chr12:94008770-94008910 (+)
DBA/2J	ENSMUSG00185047636	pseudogene	Chr12:95807056-95807196 (+)
FVB/NJ	ENSMUSG00205021881	pseudogene	Chr12:93178547-93178687 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230031225	pseudogene	Chr12:102897050-102897190 (+)
NOD/ShiLtJ	ENSMUSG00190005356	pseudogene	Chr12:92138113-92138253 (-)
NZO/HlLtJ	ENSMUSG00225039142	pseudogene	Chr12:104620756-104620896 (+)
PWK/PhJ	ENSLUMG00010014039	pseudogene	Chr12:94028816-94028956 (+)
SPRET/EiJ	ENSMSPG00010019275	pseudogene	Chr12:96449315-96449455 (+)
WSB/EiJ	ENSIUOG00005009726	pseudogene	Chr12:93014522-93014662 (+)

Homology

• Gene Tree
  Gm53034
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000118530 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118530	Ensembl Gene Model | MGI Sequence Detail	141	C57BL/6J
transcript	ENSMUST00000238798	Ensembl | MGI Sequence Detail	141	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;