Gm53033 Pseudogene Detail

Summary

• Symbol
  Gm53033
• Name
  predicted gene, 53033

• Feature Type
  pseudogene
• IDs
  MGI:6388926
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:24226031-24229267 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  214 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388926	pseudogene	Chr7:24226031-24229267 (-)
129S1/SvImJ	ENSMUSG00200046548	pseudogene	Chr7:14229055-14232291 (-)
A/J	ENSMUSG00195054070	pseudogene	Chr7:16665810-16669049 (-)
AKR/J	ENSMUSG00220053771	pseudogene	Chr7:27721526-27724765 (+)
BALB/cJ	ENSMUSG00180054009	pseudogene	Chr7:14737805-14741042 (-)
C3H/HeJ	ENSMUSG00175052656	pseudogene	Chr7:15787734-15791195 (-)
C57BL/6NJ	ENSMUSG00215054852	pseudogene	Chr7:14141789-14145027 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052669	pseudogene	Chr7:15836020-15839367 (-)
CBA/J	ENSMUSG00210053217	pseudogene	Chr7:14973467-14976928 (-)
DBA/2J	ENSMUSG00185055429	pseudogene	Chr7:18181483-18184720 (-)
FVB/NJ	ENSMUSG00205052501	pseudogene	Chr7:14978269-14981505 (-)
JF1/MsJ	ENSUMUG00000057553	pseudogene	Chr7:22483294-22486759 (-)
LP/J	ENSMUSG00230053740	pseudogene	Chr7:23455419-23458655 (-)
NOD/ShiLtJ	ENSMUSG00190053407	pseudogene	Chr7:14455187-14458648 (-)
NZO/HlLtJ	ENSMUSG00225027123	pseudogene	Chr7:22123294-22126531 (-)
PWK/PhJ	ENSLUMG00010051349	pseudogene	Chr7:14417403-14420808 (-)
SPRET/EiJ	ENSMSPG00010051601	pseudogene	Chr7:14077519-14080593 (-)
WSB/EiJ	ENSIUOG00005052578	pseudogene	Chr7:8914730-8917891 (-)

Homology

• Gene Tree
  Gm53033
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118544 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118544	Ensembl Gene Model | MGI Sequence Detail	3237	C57BL/6J
transcript	ENSMUST00000238918	Ensembl | MGI Sequence Detail	480	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;