Gm53032 Pseudogene Detail

Summary

• Symbol
  Gm53032
• Name
  predicted gene, 53032

• Feature Type
  pseudogene
• IDs
  MGI:6388925
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:115075813-115077415 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388925	pseudogene	Chr4:115075813-115077415 (+)
129S1/SvImJ	ENSMUSG00200050148	pseudogene	Chr4:108958423-108960025 (+)
A/J	ENSMUSG00195047278	pseudogene	Chr4:110291344-110292946 (+)
AKR/J	ENSMUSG00220012603	pseudogene	Chr4:109577750-109579352 (+)
BALB/cJ	ENSMUSG00180048340	pseudogene	Chr4:108304915-108306517 (+)
C3H/HeJ	ENSMUSG00175042748	pseudogene	Chr4:109319389-109320991 (+)
C57BL/6NJ	ENSMUSG00215035261	pseudogene	Chr4:110446260-110447862 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022445	pseudogene	Chr4:109099560-109101172 (+)
CBA/J	ENSMUSG00210053310	pseudogene	Chr4:108932920-108934522 (+)
DBA/2J	ENSMUSG00185050904	pseudogene	Chr4:110454759-110456361 (+)
FVB/NJ	ENSMUSG00205045757	pseudogene	Chr4:108504583-108506185 (+)
JF1/MsJ	ENSUMUG00000048966	pseudogene	Chr4:110405866-110407469 (+)
LP/J	ENSMUSG00230046065	pseudogene	Chr4:113775789-113777391 (+)
NOD/ShiLtJ	ENSMUSG00190048633	pseudogene	Chr4:108302352-108303954 (+)
NZO/HlLtJ	ENSMUSG00225011574	pseudogene	Chr4:119263209-119264811 (+)
PWK/PhJ	ENSLUMG00010049136	pseudogene	Chr4:107799996-107801599 (+)
SPRET/EiJ	ENSMSPG00010029461	pseudogene	Chr4:109951151-109952760 (+)
WSB/EiJ	ENSIUOG00005044350	pseudogene	Chr4:108615600-108617202 (+)

Homology

• Gene Tree
  Gm53032
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118615 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118615	Ensembl Gene Model | MGI Sequence Detail	1603	C57BL/6J
transcript	ENSMUST00000239272	Ensembl | MGI Sequence Detail	651	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;