Gm53031 Pseudogene Detail

Summary

• Symbol
  Gm53031
• Name
  predicted gene, 53031

• Feature Type
  pseudogene
• IDs
  MGI:6388924
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:24994995-25066211 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2266 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388924	pseudogene	Chr2:24994995-25066211 (+)
129S1/SvImJ	ENSMUSG00200053348	pseudogene	Chr2:21990418-22050339 (+)
A/J	ENSMUSG00195050438	pseudogene	Chr2:22081480-22141066 (+)
AKR/J	ENSMUSG00220053566	pseudogene	Chr2:22199319-22258897 (+)
BALB/cJ	ENSMUSG00180054297	pseudogene	Chr2:22092065-22151992 (+)
C3H/HeJ	ENSMUSG00175053732	pseudogene	Chr2:22056253-22116173 (+)
C57BL/6NJ	ENSMUSG00215049830	pseudogene	Chr2:22114941-22174868 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053368	pseudogene	Chr2:21836072-21893477 (+)
CBA/J	ENSMUSG00210017852	pseudogene	Chr2:22095235-22155156 (+)
DBA/2J	ENSMUSG00185052907	pseudogene	Chr2:21995753-22055327 (+)
FVB/NJ	ENSMUSG00205050954	pseudogene	Chr2:21849047-21908967 (+)
JF1/MsJ	ENSUMUG00000056051	pseudogene	Chr2:21910418-21968560 (+)
LP/J	ENSMUSG00230046130	pseudogene	Chr2:23926428-23986344 (+)
NOD/ShiLtJ	ENSMUSG00190053157	pseudogene	Chr2:22086727-22146171 (+)
NZO/HlLtJ	ENSMUSG00225011338	pseudogene	Chr2:31677088-31736998 (+)
PWK/PhJ	ENSLUMG00010052535	pseudogene	Chr2:22005153-22066529 (+)
SPRET/EiJ	ENSMSPG00010047773	pseudogene	Chr2:22694302-22753560 (+)
WSB/EiJ	ENSIUOG00005052962	pseudogene	Chr2:21953493-22013486 (+)

Homology

• Gene Tree
  Gm53031
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118563 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118563	Ensembl Gene Model | MGI Sequence Detail	71217	C57BL/6J
transcript	ENSMUST00000238850	Ensembl | MGI Sequence Detail	2289	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;