Gm53030 Pseudogene Detail

Summary

• Symbol
  Gm53030
• Name
  predicted gene, 53030

• Feature Type
  pseudogene
• IDs
  MGI:6388923
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:111678011-111678103 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388923	pseudogene	Chr8:111678011-111678103 (-)
129S1/SvImJ	ENSMUSG00200014949	pseudogene	Chr8:105982213-105982305 (-)
A/J	ENSMUSG00195021433	pseudogene	Chr8:106294819-106294911 (-)
AKR/J	ENSMUSG00220015408	pseudogene	Chr8:106437236-106437328 (-)
BALB/cJ	ENSMUSG00180027035	pseudogene	Chr8:106300121-106300213 (-)
C3H/HeJ	ENSMUSG00175025516	pseudogene	Chr8:106357139-106357231 (-)
C57BL/6NJ	ENSMUSG00215037452	pseudogene	Chr8:105960167-105960259 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034879	pseudogene	Chr8:105711388-105711480 (-)
CBA/J	ENSMUSG00210038293	pseudogene	Chr8:106284290-106284382 (-)
DBA/2J	ENSMUSG00185018955	pseudogene	Chr8:112393402-112393494 (-)
FVB/NJ	ENSMUSG00205026761	pseudogene	Chr8:105296754-105296846 (-)
JF1/MsJ	ENSUMUG00000020878	pseudogene	Chr8:114726680-114726772 (-)
LP/J	ENSMUSG00230036441	pseudogene	Chr8:116073190-116073282 (-)
NOD/ShiLtJ	ENSMUSG00190028342	pseudogene	Chr8:106435282-106435374 (-)
NZO/HlLtJ	ENSMUSG00225023291	pseudogene	Chr8:119423874-119423966 (-)
PWK/PhJ	ENSLUMG00010029581	pseudogene	Chr8:106169725-106169817 (-)
SPRET/EiJ	ENSMSPG00010042912	pseudogene	Chr8:108275469-108275561 (-)
WSB/EiJ	ENSIUOG00005034173	pseudogene	Chr8:107088437-107088529 (-)
WSB/EiJ	ENSIUOG00005034728	pseudogene	Chr8:107152912-107153004 (-)

Homology

• Gene Tree
  Gm53030
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000118587 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118587	Ensembl Gene Model | MGI Sequence Detail	93	C57BL/6J
transcript	ENSMUST00000239383	Ensembl | MGI Sequence Detail	93	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;