Gm53029 Pseudogene Detail

Summary

• Symbol
  Gm53029
• Name
  predicted gene, 53029

• Feature Type
  pseudogene
• IDs
  MGI:6388922
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:74272604-74312293 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1379 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388922	pseudogene	Chr15:74272604-74312293 (-)
129S1/SvImJ	ENSMUSG00200019878	pseudogene	Chr15:71376404-71416511 (-)
A/J	ENSMUSG00195051703	pseudogene	Chr15:71445564-71485257 (-)
AKR/J	ENSMUSG00220052821	pseudogene	Chr15:71366127-71405821 (-)
BALB/cJ	ENSMUSG00180053303	pseudogene	Chr15:71218022-71257723 (-)
C3H/HeJ	ENSMUSG00175053550	pseudogene	Chr15:71579980-71619673 (-)
C57BL/6NJ	ENSMUSG00215052856	pseudogene	Chr15:71275218-71314907 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020523	pseudogene	Chr15:70876634-70916427 (-)
CBA/J	ENSMUSG00210048865	pseudogene	Chr15:71355329-71395035 (-)
DBA/2J	ENSMUSG00185051450	pseudogene	Chr15:71300721-71340419 (-)
FVB/NJ	ENSMUSG00205010728	pseudogene	Chr15:71046577-71086272 (-)
JF1/MsJ	ENSUMUG00000018564	pseudogene	Chr15:70939399-70979474 (-)
LP/J	ENSMUSG00230053003	pseudogene	Chr15:74664822-74704515 (-)
NOD/ShiLtJ	ENSMUSG00190053825	pseudogene	Chr15:71408266-71448003 (-)
NZO/HlLtJ	ENSMUSG00225054131	pseudogene	Chr15:74935022-74974763 (-)
PWK/PhJ	ENSLUMG00010011101	pseudogene	Chr15:71217185-71257176 (-)
SPRET/EiJ	ENSMSPG00010051506	pseudogene	Chr15:72903669-72942841 (-)
WSB/EiJ	ENSIUOG00005020795	pseudogene	Chr15:71395859-71435610 (-)

Homology

• Gene Tree
  Gm53029
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118581 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118581	Ensembl Gene Model | MGI Sequence Detail	39690	C57BL/6J
transcript	ENSMUST00000239328	Ensembl | MGI Sequence Detail	795	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;