Gm53027 Pseudogene Detail

Summary

• Symbol
  Gm53027
• Name
  predicted gene, 53027

• Feature Type
  pseudogene
• IDs
  MGI:6388919
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:139484178-139484348 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  60 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388919	pseudogene	ChrX:139484178-139484348 (-)
129S1/SvImJ	ENSMUSG00200047654	pseudogene	ChrX:118488168-118488338 (-)
A/J	ENSMUSG00195048360	pseudogene	ChrX:122347232-122347402 (-)
AKR/J	ENSMUSG00220038281	pseudogene	ChrX:115799070-115799240 (-)
BALB/cJ	ENSMUSG00180039349	pseudogene	ChrX:118779949-118780119 (-)
C3H/HeJ	ENSMUSG00175035155	pseudogene	ChrX:122648650-122648820 (-)
C57BL/6NJ	ENSMUSG00215044943	pseudogene	ChrX:119192778-119192948 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040881	pseudogene	ChrX:119848004-119848174 (-)
CBA/J	ENSMUSG00210043527	pseudogene	ChrX:119576296-119576466 (-)
DBA/2J	ENSMUSG00185033551	pseudogene	ChrX:133467221-133467391 (-)
FVB/NJ	ENSMUSG00205036933	pseudogene	ChrX:117974312-117974482 (-)
JF1/MsJ	ENSUMUG00000032135	pseudogene	ChrX:152736694-152736864 (-)
LP/J	ENSMUSG00230040499	pseudogene	ChrX:140089089-140089259 (-)
NOD/ShiLtJ	ENSMUSG00190042013	pseudogene	ChrX:118983876-118984046 (-)
NZO/HlLtJ	ENSMUSG00225042937	pseudogene	ChrX:144786229-144786399 (-)
PWK/PhJ	ENSLUMG00010043720	pseudogene	ChrX:117478607-117478777 (-)
SPRET/EiJ	ENSMSPG00010039949	pseudogene	ChrX:122055923-122056093 (-)
WSB/EiJ	ENSIUOG00005039872	pseudogene	ChrX:119653029-119653199 (-)

Homology

• Gene Tree
  Gm53027
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118524 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118524	Ensembl Gene Model | MGI Sequence Detail	171	C57BL/6J
transcript	ENSMUST00000239013	Ensembl | MGI Sequence Detail	171	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;