Gm53025 Pseudogene Detail

Summary

• Symbol
  Gm53025
• Name
  predicted gene, 53025

• Feature Type
  pseudogene
• IDs
  MGI:6388917
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:20750824-20769171 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  729 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388917	pseudogene	Chr9:20750824-20769171 (+)
129S1/SvImJ	ENSMUSG00200050173	pseudogene	Chr9:17704756-17723145 (+)
A/J	ENSMUSG00195039972	pseudogene	Chr9:17541317-17559663 (+)
AKR/J	ENSMUSG00220036321	pseudogene	Chr9:17543785-17562132 (+)
BALB/cJ	ENSMUSG00180044555	pseudogene	Chr9:17669218-17687565 (+)
C3H/HeJ	ENSMUSG00175044645	pseudogene	Chr9:17637982-17656330 (+)
C57BL/6NJ	ENSMUSG00215037671	pseudogene	Chr9:17635498-17653845 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035271	pseudogene	Chr9:17672842-17691269 (+)
CBA/J	ENSMUSG00210045873	pseudogene	Chr9:17619010-17637416 (+)
DBA/2J	ENSMUSG00185027572	pseudogene	Chr9:17734484-17752830 (+)
FVB/NJ	ENSMUSG00205044634	pseudogene	Chr9:17967502-17985884 (+)
JF1/MsJ	ENSUMUG00000048769	pseudogene	Chr9:17841944-17860327 (+)
LP/J	ENSMUSG00230043946	pseudogene	Chr9:18125860-18144219 (+)
NOD/ShiLtJ	ENSMUSG00190044932	pseudogene	Chr9:17659468-17677873 (+)
NZO/HlLtJ	ENSMUSG00225051802	pseudogene	Chr9:18076458-18094833 (+)
PWK/PhJ	ENSLUMG00010047040	pseudogene	Chr9:17731432-17749849 (+)
SPRET/EiJ	ENSMSPG00010024190	pseudogene	Chr9:17962617-17984488 (+)
WSB/EiJ	ENSIUOG00005046919	pseudogene	Chr9:17206380-17224781 (+)

Homology

• Gene Tree
  Gm53025
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118527 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118527	Ensembl Gene Model | MGI Sequence Detail	18348	C57BL/6J
transcript	ENSMUST00000238827	Ensembl | MGI Sequence Detail	2094	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;