Gm53022 Pseudogene Detail

Summary

• Symbol
  Gm53022
• Name
  predicted gene, 53022

• Feature Type
  pseudogene
• IDs
  MGI:6388914
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:94202956-94213375 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  277 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388914	pseudogene	Chr8:94202956-94213375 (-)
129S1/SvImJ	ENSMUSG00200017693	pseudogene	Chr8:88553492-88563910 (-)
A/J	ENSMUSG00195029785	pseudogene	Chr8:88924612-88935031 (-)
AKR/J	ENSMUSG00220042873	pseudogene	Chr8:88941089-88951506 (-)
BALB/cJ	ENSMUSG00180024908	pseudogene	Chr8:88808531-88818950 (-)
C3H/HeJ	ENSMUSG00175027804	pseudogene	Chr8:88862747-88873166 (-)
C57BL/6NJ	ENSMUSG00215030907	pseudogene	Chr8:88474250-88483562 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210037133	pseudogene	Chr8:88802354-88812773 (-)
DBA/2J	ENSMUSG00185025144	pseudogene	Chr8:94911119-94921538 (-)
FVB/NJ	ENSMUSG00205018015	pseudogene	Chr8:87899317-87901677 (-)
JF1/MsJ	ENSUMUG00000047077	pseudogene	Chr8:97264974-97275393 (-)
LP/J	ENSMUSG00230031478	pseudogene	Chr8:98547268-98557686 (-)
NOD/ShiLtJ	ENSMUSG00190016430	pseudogene	Chr8:88915674-88926309 (-)
NZO/HlLtJ	ENSMUSG00225011962	pseudogene	Chr8:101951831-101962250 (-)
PWK/PhJ	ENSLUMG00010044454	pseudogene	Chr8:88609521-88613675 (-)
SPRET/EiJ	ENSMSPG00010034353	pseudogene	Chr8:90661073-90664722 (-)
WSB/EiJ	ENSIUOG00005019555	pseudogene	Chr8:89622339-89626492 (-)

Homology

• Gene Tree
  Gm53022
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000118579 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118579	Ensembl Gene Model | MGI Sequence Detail	10420	C57BL/6J
transcript	ENSMUST00000239350	Ensembl | MGI Sequence Detail	344	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;