Gm53021 Pseudogene Detail

Summary

• Symbol
  Gm53021
• Name
  predicted gene, 53021

• Feature Type
  pseudogene
• IDs
  MGI:6388913
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:95926477-95926647 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388913	pseudogene	Chr4:95926477-95926647 (-)
129S1/SvImJ	ENSMUSG00200010118	pseudogene	Chr4:90901362-90901532 (-)
A/J	ENSMUSG00195009428	pseudogene	Chr4:91440850-91441020 (-)
AKR/J	ENSMUSG00220019851	pseudogene	Chr4:90889380-90889550 (-)
BALB/cJ	ENSMUSG00180006133	pseudogene	Chr4:90386412-90386582 (-)
C3H/HeJ	ENSMUSG00175007983	pseudogene	Chr4:91347205-91347375 (-)
C57BL/6NJ	ENSMUSG00215017582	pseudogene	Chr4:91296650-91296820 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019064	pseudogene	Chr4:90682497-90682667 (-)
CBA/J	ENSMUSG00210016554	pseudogene	Chr4:90902221-90902391 (-)
DBA/2J	ENSMUSG00185002968	pseudogene	Chr4:91701695-91701865 (-)
FVB/NJ	ENSMUSG00205014072	pseudogene	Chr4:89847246-89847416 (-)
JF1/MsJ	ENSUMUG00000003617	pseudogene	Chr4:91834110-91834280 (-)
LP/J	ENSMUSG00230022831	pseudogene	Chr4:95010342-95010512 (-)
NOD/ShiLtJ	ENSMUSG00190017592	pseudogene	Chr4:90369420-90369590 (-)
NZO/HlLtJ	ENSMUSG00225003737	pseudogene	Chr4:100157354-100157524 (-)
PWK/PhJ	ENSLUMG00010003448	pseudogene	Chr4:89557088-89557258 (-)
SPRET/EiJ	ENSMSPG00010015908	pseudogene	Chr4:91617151-91617319 (-)
WSB/EiJ	ENSIUOG00005012714	pseudogene	Chr4:90679962-90680132 (-)

Homology

• Gene Tree
  Gm53021
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118637 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118637	Ensembl Gene Model | MGI Sequence Detail	171	C57BL/6J
transcript	ENSMUST00000239271	Ensembl | MGI Sequence Detail	171	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;