Gm52997 Pseudogene Detail

Summary

• Symbol
  Gm52997
• Name
  predicted gene, 52997

• Feature Type
  pseudogene
• IDs
  MGI:6388883
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:9439753-9440017 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388883	pseudogene	ChrX:9439753-9440017 (-)
129S1/SvImJ	ENSMUSG00200034478	pseudogene	ChrX:4171571-4171835 (-)
A/J	ENSMUSG00195041363	pseudogene	ChrX:4158338-4158602 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180031494	pseudogene	ChrX:4156081-4156345 (-)
C3H/HeJ	ENSMUSG00175035010	pseudogene	ChrX:4169345-4169609 (-)
C57BL/6NJ	ENSMUSG00215041661	pseudogene	ChrX:4829055-4829319 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035022	pseudogene	ChrX:4162072-4162336 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185036888	pseudogene	ChrX:10810413-10810677 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000043820	pseudogene	ChrX:24681527-24681790 (-)
LP/J	ENSMUSG00230032288	pseudogene	ChrX:15377943-15378207 (-)
NOD/ShiLtJ	ENSMUSG00190044749	pseudogene	ChrX:4178636-4178900 (-)
NZO/HlLtJ	ENSMUSG00225033791	pseudogene	ChrX:20596272-20596536 (-)
PWK/PhJ	ENSLUMG00010035735	pseudogene	ChrX:4104799-4105062 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm52997
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000118573 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118573	Ensembl Gene Model | MGI Sequence Detail	265	C57BL/6J
transcript	ENSMUST00000238955	Ensembl | MGI Sequence Detail	265	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;