Gm52994 Pseudogene Detail

Summary

• Symbol
  Gm52994
• Name
  predicted gene, 52994

• Feature Type
  pseudogene
• IDs
  MGI:6388880
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:6371720-6372011 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  11 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388880	pseudogene	Chr17:6371720-6372011 (-)
129S1/SvImJ	ENSMUSG00200035259	pseudogene	Chr17:3258123-3258413 (-)
A/J	ENSMUSG00195024209	pseudogene	Chr17:3223525-3223816 (-)
AKR/J	ENSMUSG00220029916	pseudogene	Chr17:3470280-3470571 (-)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215031333	pseudogene	Chr17:3254436-3254727 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185024888	pseudogene	Chr17:3622861-3623152 (+)
DBA/2J	ENSMUSG00185024011	pseudogene	Chr17:3358035-3358326 (-)
FVB/NJ	ENSMUSG00205010422	pseudogene	Chr17:3245809-3246100 (+)
FVB/NJ	ENSMUSG00205009923	pseudogene	Chr17:3310458-3310749 (-)
JF1/MsJ	ENSUMUG00000037908	pseudogene	Chr17:3327815-3328106 (-)
LP/J	ENSMUSG00230035578	pseudogene	Chr17:4455167-4455458 (-)
LP/J	ENSMUSG00230035671	pseudogene	Chr17:4921332-4921623 (-)
LP/J	ENSMUSG00230035609	pseudogene	Chr17:4791307-4791598 (-)
LP/J	ENSMUSG00230035529	pseudogene	Chr17:4625723-4626014 (-)
LP/J	ENSMUSG00230035714	pseudogene	Chr17:5091873-5092164 (-)
LP/J	ENSMUSG00230035509	pseudogene	Chr17:4390008-4390299 (+)
NOD/ShiLtJ	ENSMUSG00190041946	pseudogene	Chr17:3410927-3411218 (-)
NOD/ShiLtJ	ENSMUSG00190041179	pseudogene	Chr17:3246859-3247150 (-)
NOD/ShiLtJ	ENSMUSG00190042034	pseudogene	Chr17:3583894-3584185 (-)
NZO/HlLtJ	ENSMUSG00225029266	pseudogene	Chr17:7095539-7095830 (-)
NZO/HlLtJ	ENSMUSG00225029251	pseudogene	Chr17:6929968-6930259 (-)
NZO/HlLtJ	ENSMUSG00225029249	pseudogene	Chr17:6693977-6694268 (+)
NZO/HlLtJ	ENSMUSG00225029259	pseudogene	Chr17:6759133-6759424 (-)
PWK/PhJ	ENSLUMG00010019541	pseudogene	Chr17:3345084-3345375 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm52994
  

Human Diseases

• References
  6 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  372 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm52994
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00000118494 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118494	Ensembl Gene Model | MGI Sequence Detail	292	C57BL/6J
transcript	ENSMUST00000238962	Ensembl | MGI Sequence Detail	292	Not Applicable

References

• Summaries
  All 373

  Diseases 6

  Phenotypes 372
• Earliest
  J:30229 Davisson MT, et al., Segmental trisomy as a mouse model for Down syndrome. Prog Clin Biol Res. 1993;384:117-33
• Latest
  J:391449 Thibodeau J, et al., Loss of cystathionine-beta-synthase contributes to elevated OXPHOS, a vulnerability in Ara-C-resistant Myeloid Leukemia in Down syndrome. Biochem Pharmacol. 2026 Feb 13;247:117815