Gm52991 Pseudogene Detail

Summary

• Symbol
  Gm52991
• Name
  predicted gene, 52991

• Feature Type
  pseudogene
• IDs
  MGI:6388875
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:24157316-24163272 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  189 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388875	pseudogene	Chr14:24157316-24163272 (-)
129S1/SvImJ	ENSMUSG00200015520	pseudogene	Chr14:15959357-15965315 (-)
A/J	ENSMUSG00195022634	pseudogene	Chr14:17037871-17043829 (-)
AKR/J	ENSMUSG00220028840	pseudogene	Chr14:16141615-16147573 (-)
BALB/cJ	ENSMUSG00180039849	pseudogene	Chr14:16129832-16135790 (-)
C3H/HeJ	ENSMUSG00175023860	pseudogene	Chr14:16197627-16203585 (-)
C57BL/6NJ	ENSMUSG00215035517	pseudogene	Chr14:16436157-16442114 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033436	pseudogene	Chr14:16300552-16306508 (-)
CBA/J	ENSMUSG00210027105	pseudogene	Chr14:16432446-16438403 (-)
DBA/2J	ENSMUSG00185043126	pseudogene	Chr14:20717533-20723490 (-)
FVB/NJ	ENSMUSG00205040718	pseudogene	Chr14:16251318-16257275 (-)
JF1/MsJ	ENSUMUG00000047303	pseudogene	Chr14:27927455-27933385 (-)
LP/J	ENSMUSG00230040711	pseudogene	Chr14:27999035-28004992 (-)
NOD/ShiLtJ	ENSMUSG00190038867	pseudogene	Chr14:16433447-16439403 (-)
NZO/HlLtJ	ENSMUSG00225037603	pseudogene	Chr14:22222896-22228855 (-)
PWK/PhJ	ENSLUMG00010021906	pseudogene	Chr14:4577715-4583681 (-)
SPRET/EiJ	ENSMSPG00010033590	pseudogene	Chr14:18077306-18083391 (-)
WSB/EiJ	ENSIUOG00005034061	pseudogene	Chr14:16275438-16281378 (-)

Homology

• Gene Tree
  Gm52991
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118498 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118498	Ensembl Gene Model | MGI Sequence Detail	5957	C57BL/6J
transcript	ENSMUST00000239043	Ensembl | MGI Sequence Detail	870	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;