Gm52987 Pseudogene Detail

Summary

• Symbol
  Gm52987
• Name
  predicted gene, 52987

• Feature Type
  pseudogene
• IDs
  MGI:6388870
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:35824496-35824562 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388870	pseudogene	Chr17:35824496-35824562 (-)
129S1/SvImJ	ENSMUSG00200051450	pseudogene	Chr17:31434701-31434767 (-)
A/J	ENSMUSG00195046691	pseudogene	Chr17:32516832-32516898 (-)
AKR/J	ENSMUSG00220052081	pseudogene	Chr17:31305059-31305125 (-)
BALB/cJ	ENSMUSG00180043638	pseudogene	Chr17:31886665-31886731 (-)
C3H/HeJ	ENSMUSG00175043200	pseudogene	Chr17:31190921-31190987 (-)
C57BL/6NJ	ENSMUSG00215053959	pseudogene	Chr17:31274982-31275048 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052117	pseudogene	Chr17:32340131-32340197 (-)
CBA/J	ENSMUSG00210052496	pseudogene	Chr17:31013008-31013074 (-)
DBA/2J	ENSMUSG00185055484	pseudogene	Chr17:33905818-33905884 (-)
FVB/NJ	ENSMUSG00205053672	pseudogene	Chr17:31571142-31571208 (-)
JF1/MsJ	ENSUMUG00000057339	pseudogene	Chr17:32847192-32847258 (-)
LP/J	ENSMUSG00230054704	pseudogene	Chr17:34923420-34923486 (-)
NOD/ShiLtJ	ENSMUSG00190053703	pseudogene	Chr17:31190318-31190384 (-)
NZO/HlLtJ	ENSMUSG00225055017	pseudogene	Chr17:37000123-37000189 (-)
PWK/PhJ	ENSLUMG00010047448	pseudogene	Chr17:30824036-30824102 (-)
SPRET/EiJ	ENSMSPG00010050015	pseudogene	Chr17:32038772-32038838 (-)
WSB/EiJ	ENSIUOG00005052031	pseudogene	Chr17:32009963-32010029 (-)

Homology

• Gene Tree
  Gm52987
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118589 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118589	Ensembl Gene Model | MGI Sequence Detail	67	C57BL/6J
transcript	ENSMUST00000239282	Ensembl | MGI Sequence Detail	67	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;