Gm52983 Pseudogene Detail

Summary

• Symbol
  Gm52983
• Name
  predicted gene, 52983

• Feature Type
  pseudogene
• IDs
  MGI:6388866
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:113945691-113945745 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388866	pseudogene	Chr9:113945691-113945745 (-)
129S1/SvImJ	ENSMUSG00200044642	pseudogene	Chr9:111036122-111036176 (-)
A/J	ENSMUSG00195045683	pseudogene	Chr9:110360619-110360673 (-)
AKR/J	ENSMUSG00220032257	pseudogene	Chr9:110691805-110691859 (-)
BALB/cJ	ENSMUSG00180035694	pseudogene	Chr9:110780346-110780400 (-)
C3H/HeJ	ENSMUSG00175047045	pseudogene	Chr9:111001415-111001469 (-)
C57BL/6NJ	ENSMUSG00215041847	pseudogene	Chr9:110890795-110890849 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037153	pseudogene	Chr9:110688036-110688090 (-)
CBA/J	ENSMUSG00210045746	pseudogene	Chr9:110723292-110723346 (-)
DBA/2J	ENSMUSG00185044276	pseudogene	Chr9:111060321-111060375 (-)
FVB/NJ	ENSMUSG00205049959	pseudogene	Chr9:110982073-110982127 (-)
JF1/MsJ	ENSUMUG00000055648	pseudogene	Chr9:110824863-110824917 (-)
LP/J	ENSMUSG00230050554	pseudogene	Chr9:111167202-111167256 (-)
NOD/ShiLtJ	ENSMUSG00190050780	pseudogene	Chr9:110653158-110653212 (-)
NZO/HlLtJ	ENSMUSG00225024689	pseudogene	Chr9:111448752-111448806 (-)
PWK/PhJ	ENSLUMG00010045920	pseudogene	Chr9:110835671-110835725 (-)
SPRET/EiJ	ENSMSPG00010024627	pseudogene	Chr9:112675980-112676034 (-)
WSB/EiJ	ENSIUOG00005047972	pseudogene	Chr9:110121950-110122004 (-)

Homology

• Gene Tree
  Gm52983
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118582 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118582	Ensembl Gene Model | MGI Sequence Detail	55	C57BL/6J
transcript	ENSMUST00000239187	Ensembl | MGI Sequence Detail	55	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;