Gm52953 Pseudogene Detail

Summary

• Symbol
  Gm52953
• Name
  predicted gene, 52953

• Feature Type
  pseudogene
• IDs
  MGI:6388832
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:65592299-65592541 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6388832	pseudogene	Chr2:65592299-65592541 (-)
129S1/SvImJ	ENSMUSG00200037242	pseudogene	Chr2:62665176-62665418 (-)
A/J	ENSMUSG00195023721	pseudogene	Chr2:62794798-62795040 (-)
AKR/J	ENSMUSG00220041773	pseudogene	Chr2:62747246-62747488 (-)
BALB/cJ	ENSMUSG00180042203	pseudogene	Chr2:62741191-62741433 (-)
C3H/HeJ	ENSMUSG00175040081	pseudogene	Chr2:62820505-62820747 (-)
C57BL/6NJ	ENSMUSG00215033839	pseudogene	Chr2:62687063-62687305 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009469	pseudogene	Chr2:62101976-62102218 (-)
CBA/J	ENSMUSG00210040261	pseudogene	Chr2:62863512-62863754 (-)
DBA/2J	ENSMUSG00185042487	pseudogene	Chr2:62720290-62720532 (-)
FVB/NJ	ENSMUSG00205036715	pseudogene	Chr2:62233753-62233995 (-)
JF1/MsJ	ENSUMUG00000006608	pseudogene	Chr2:62380317-62380559 (-)
LP/J	ENSMUSG00230023131	pseudogene	Chr2:64548944-64549186 (-)
NOD/ShiLtJ	ENSMUSG00190040423	pseudogene	Chr2:62788441-62788683 (-)
NZO/HlLtJ	ENSMUSG00225015591	pseudogene	Chr2:72277238-72277480 (-)
PWK/PhJ	ENSLUMG00010034228	pseudogene	Chr2:62538330-62538572 (-)
SPRET/EiJ	ENSMSPG00010038575	pseudogene	Chr2:63849426-63849668 (-)
WSB/EiJ	ENSIUOG00005019521	pseudogene	Chr2:62847055-62847297 (-)

Homology

• Gene Tree
  Gm52953
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118566 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118566	Ensembl Gene Model | MGI Sequence Detail	243	C57BL/6J
transcript	ENSMUST00000238931	Ensembl | MGI Sequence Detail	243	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;