Gm51440 Pseudogene Detail

Summary

• Symbol
  Gm51440
• Name
  predicted gene, 51440

• Feature Type
  pseudogene
• IDs
  MGI:6365034
  NCBI Gene: 115486447
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:3562452-3563881 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6365034	pseudogene	Chr7:3562452-3563881 (-)
129S1/SvImJ	ENSMUSG00200042666	pseudogene	Chr7:479911-481345 (-)
A/J	ENSMUSG00195053451	pseudogene	Chr7:398409-399851 (-)
AKR/J	ENSMUSG00220031310	pseudogene	Chr7:3626337-3627779 (+)
BALB/cJ	ENSMUSG00180049800	pseudogene	Chr7:398529-399965 (-)
C3H/HeJ	ENSMUSG00175051219	pseudogene	Chr7:390936-392370 (-)
C57BL/6NJ	ENSMUSG00215045770	pseudogene	Chr7:384283-385714 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028584	pseudogene	Chr7:396211-397811 (-)
CBA/J	ENSMUSG00210049350	pseudogene	Chr7:390872-392304 (-)
DBA/2J	ENSMUSG00185043704	pseudogene	Chr7:576320-577756 (-)
FVB/NJ	ENSMUSG00205045764	pseudogene	Chr7:394476-395912 (-)
JF1/MsJ	ENSUMUG00000051750	pseudogene	Chr7:597295-598704 (-)
LP/J	ENSMUSG00230040092	pseudogene	Chr7:3597893-3599329 (-)
NOD/ShiLtJ	ENSMUSG00190052182	pseudogene	Chr7:398309-399747 (-)
NZO/HlLtJ	ENSMUSG00225021662	pseudogene	Chr7:1404902-1406339 (-)
PWK/PhJ	ENSLUMG00010051941	pseudogene	Chr7:4103172-4104563 (-)
SPRET/EiJ	ENSMSPG00010049613	pseudogene	Chr7:595687-597103 (-)
WSB/EiJ	ENSIUOG00005053100	pseudogene	Chr7:383912-385345 (-)

Homology

• Gene Tree
  Gm51440
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118635 (Evidence)
• NCBI Gene
  115486447

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118635	Ensembl Gene Model | MGI Sequence Detail	1430	C57BL/6J
transcript	ENSMUST00000239381	Ensembl | MGI Sequence Detail	531	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;