Gm50484 Gene Detail

Summary

• Symbol
  Gm50484
• Name
  predicted gene, 50484

• Feature Type
  lncRNA gene
• IDs
  MGI:6324757
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:119250697-119257121 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  303 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6324757	lncRNA gene	Chr4:119250697-119257121 (+)
129S1/SvImJ	ENSMUSG00200014494	lncRNA gene	Chr4:113155526-113161929 (+)
A/J	ENSMUSG00195032906	lncRNA gene	Chr4:114401599-114407964 (+)
AKR/J	ENSMUSG00220022558	lncRNA gene	Chr4:113762325-113768749 (+)
BALB/cJ	ENSMUSG00180046341	lncRNA gene	Chr4:112463317-112469692 (+)
C3H/HeJ	ENSMUSG00175026029	lncRNA gene	Chr4:113476495-113482870 (+)
C57BL/6NJ	ENSMUSG00215038891	lncRNA gene	Chr4:114588685-114595110 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046078	lncRNA gene	Chr4:113282419-113288579 (+)
CBA/J	ENSMUSG00210052692	lncRNA gene	Chr4:113082989-113089364 (+)
DBA/2J	ENSMUSG00185049493	lncRNA gene	Chr4:114636585-114642949 (+)
FVB/NJ	ENSMUSG00205028029	lncRNA gene	Chr4:112559019-112565436 (+)
JF1/MsJ	ENSUMUG00000025433	lncRNA gene	Chr4:114541216-114547597 (+)
LP/J	ENSMUSG00230046395	lncRNA gene	Chr4:117973288-117979690 (+)
NOD/ShiLtJ	ENSMUSG00190045799	lncRNA gene	Chr4:112466698-112473122 (+)
NZO/HlLtJ	ENSMUSG00225016869	lncRNA gene	Chr4:123519761-123526185 (+)
PWK/PhJ	ENSLUMG00010047097	lncRNA gene	Chr4:111958836-111964860 (+)
SPRET/EiJ	ENSMSPG00010041191	lncRNA gene	Chr4:114040710-114047229 (+)
WSB/EiJ	ENSIUOG00005047804	lncRNA gene	Chr4:112776521-112782896 (+)

Homology

• Gene Tree
  Gm50484
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118403 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118403	Ensembl Gene Model | MGI Sequence Detail	6425	C57BL/6J
transcript	ENSMUST00000238574	Ensembl | MGI Sequence Detail	855	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;