Gm50431 Gene Detail

Summary

• Symbol
  Gm50431
• Name
  predicted gene, 50431

• Feature Type
  lncRNA gene
• IDs
  MGI:6303362
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:46869934-46871878 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303362	lncRNA gene	Chr19:46869934-46871878 (+)
129S1/SvImJ	ENSMUSG00200021758	lncRNA gene	Chr19:43575792-43577736 (+)
A/J	ENSMUSG00195018302	lncRNA gene	Chr19:43706159-43708103 (+)
AKR/J	ENSMUSG00220019676	lncRNA gene	Chr19:43511901-43513845 (+)
BALB/cJ	ENSMUSG00180021261	lncRNA gene	Chr19:43958244-43960188 (+)
C3H/HeJ	ENSMUSG00175006492	lncRNA gene	Chr19:43504704-43506648 (+)
C57BL/6NJ	ENSMUSG00215004918	lncRNA gene	Chr19:43568652-43570596 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016869	lncRNA gene	Chr19:43166675-43168622 (+)
CBA/J	ENSMUSG00210019292	lncRNA gene	Chr19:43584203-43586147 (+)
DBA/2J	ENSMUSG00185009367	lncRNA gene	Chr19:44081621-44083565 (+)
FVB/NJ	ENSMUSG00205037915	lncRNA gene	Chr19:43001869-43003813 (+)
JF1/MsJ	ENSUMUG00000047079	lncRNA gene	Chr19:44238712-44240656 (+)
LP/J	ENSMUSG00230026201	lncRNA gene	Chr19:44845391-44847335 (+)
NOD/ShiLtJ	ENSMUSG00190005583	lncRNA gene	Chr19:43448691-43450635 (+)
NZO/HlLtJ	ENSMUSG00225044844	lncRNA gene	Chr19:48441452-48443396 (+)
PWK/PhJ	ENSLUMG00010001181	lncRNA gene	Chr19:43404325-43406269 (+)
SPRET/EiJ	ENSMSPG00010007895	lncRNA gene	Chr19:43139330-43141280 (+)
WSB/EiJ	ENSIUOG00005007135	lncRNA gene	Chr19:42955023-42956967 (+)

Homology

• Gene Tree
  Gm50431
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117814 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117814	Ensembl Gene Model | MGI Sequence Detail	1945	C57BL/6J
transcript	ENSMUST00000236822	Ensembl | MGI Sequence Detail	1945	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;