Gm50429 Pseudogene Detail

Summary

• Symbol
  Gm50429
• Name
  predicted gene, 50429

• Feature Type
  pseudogene
• IDs
  MGI:6303359
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:59169087-59169864 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303359	pseudogene	Chr19:59169087-59169864 (+)
129S1/SvImJ	ENSMUSG00200015030	pseudogene	Chr19:55879265-55880042 (+)
A/J	ENSMUSG00195002665	pseudogene	Chr19:56052519-56053296 (+)
AKR/J	ENSMUSG00220018052	pseudogene	Chr19:55788549-55789326 (+)
BALB/cJ	ENSMUSG00180019174	pseudogene	Chr19:56277780-56278557 (+)
C3H/HeJ	ENSMUSG00175022600	pseudogene	Chr19:55814666-55815443 (+)
C57BL/6NJ	ENSMUSG00215028937	pseudogene	Chr19:55912402-55913179 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015476	pseudogene	Chr19:55470903-55471680 (+)
CBA/J	ENSMUSG00210021707	pseudogene	Chr19:55894743-55895520 (+)
DBA/2J	ENSMUSG00185028657	pseudogene	Chr19:56392780-56393557 (+)
FVB/NJ	ENSMUSG00205003734	pseudogene	Chr19:55309807-55310584 (+)
JF1/MsJ	ENSUMUG00000038654	pseudogene	Chr19:56603292-56604067 (+)
LP/J	ENSMUSG00230027814	pseudogene	Chr19:57161696-57162473 (+)
NOD/ShiLtJ	ENSMUSG00190013565	pseudogene	Chr19:55842876-55843653 (+)
NZO/HlLtJ	ENSMUSG00225021088	pseudogene	Chr19:60782176-60782951 (+)
PWK/PhJ	ENSLUMG00010018852	pseudogene	Chr19:55661934-55662709 (+)
SPRET/EiJ	ENSMSPG00010003357	pseudogene	Chr19:55500946-55501695 (+)
WSB/EiJ	ENSIUOG00005025079	pseudogene	Chr19:55266858-55267635 (+)

Homology

• Gene Tree
  Gm50429
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117834 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117834	Ensembl Gene Model | MGI Sequence Detail	778	C57BL/6J
transcript	ENSMUST00000236019	Ensembl | MGI Sequence Detail	778	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;