Gm50411 Gene Detail

Summary

• Symbol
  Gm50411
• Name
  predicted gene, 50411

• Feature Type
  lncRNA gene
• IDs
  MGI:6303327
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:59679166-59679532 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303327	lncRNA gene	Chr19:59679166-59679532 (+)
129S1/SvImJ	ENSMUSG00200014979	lncRNA gene	Chr19:56381810-56382176 (+)
A/J	ENSMUSG00195002579	lncRNA gene	Chr19:56554348-56554714 (+)
AKR/J	ENSMUSG00220018253	lncRNA gene	Chr19:56290361-56290727 (+)
BALB/cJ	ENSMUSG00180018892	lncRNA gene	Chr19:56780388-56780754 (+)
C3H/HeJ	ENSMUSG00175022874	lncRNA gene	Chr19:56323471-56323837 (+)
C57BL/6NJ	ENSMUSG00215027370	lncRNA gene	Chr19:56424040-56424406 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015691	lncRNA gene	Chr19:55973525-55973891 (+)
CBA/J	ENSMUSG00210021242	lncRNA gene	Chr19:56403451-56403817 (+)
DBA/2J	ENSMUSG00185028596	lncRNA gene	Chr19:56899365-56899731 (+)
FVB/NJ	ENSMUSG00205003869	lncRNA gene	Chr19:55811389-55811755 (+)
JF1/MsJ	ENSUMUG00000037877	lncRNA gene	Chr19:57120571-57120937 (+)
LP/J	ENSMUSG00230028561	lncRNA gene	Chr19:57664167-57664533 (+)
NOD/ShiLtJ	ENSMUSG00190013175	lncRNA gene	Chr19:56348347-56348713 (+)
NZO/HlLtJ	ENSMUSG00225021256	lncRNA gene	Chr19:61289335-61289701 (+)
PWK/PhJ	ENSLUMG00010019098	lncRNA gene	Chr19:56164827-56165193 (+)
SPRET/EiJ	ENSMSPG00010003443	lncRNA gene	Chr19:56007532-56007898 (+)
WSB/EiJ	ENSIUOG00005025024	lncRNA gene	Chr19:55766565-55766931 (+)

Homology

• Gene Tree
  Gm50411
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118190 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118190	Ensembl Gene Model | MGI Sequence Detail	367	C57BL/6J
transcript	ENSMUST00000235911	Ensembl | MGI Sequence Detail	367	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;