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Gm50400 Pseudogene Detail
Summary
  • Symbol
    Gm50400
  • Name
    predicted gene, 50400
Location &
Maps
more
  • Sequence Map
    Chr18:88432687-88433164 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    135 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6303311
 pseudogene Chr18:88432687-88433164 (-)
129S1/SvImJ ENSMUSG00200015610
 pseudogene Chr18:85721716-85722193 (-)
A/J ENSMUSG00195001341
 pseudogene Chr18:85701215-85701692 (-)
AKR/J ENSMUSG00220016817
 pseudogene Chr18:85630800-85631277 (-)
BALB/cJ ENSMUSG00180002698
 pseudogene Chr18:86304467-86304944 (-)
C3H/HeJ ENSMUSG00175018874
 pseudogene Chr18:85814514-85814991 (-)
C57BL/6NJ ENSMUSG00215004332
 pseudogene Chr18:85283139-85283616 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005005574
 pseudogene Chr18:84707457-84707936 (-)
CBA/J ENSMUSG00210018091
 pseudogene Chr18:85759419-85759896 (-)
DBA/2J ENSMUSG00185004307
 pseudogene Chr18:85657914-85658391 (-)
FVB/NJ ENSMUSG00205014651
 pseudogene Chr18:85087442-85087919 (-)
JF1/MsJ ENSUMUG00000018891
 pseudogene Chr18:85500415-85500898 (-)
LP/J ENSMUSG00230017929
 pseudogene Chr18:87784844-87785321 (-)
NOD/ShiLtJ ENSMUSG00190003549
 pseudogene Chr18:85474006-85474483 (-)
NZO/HlLtJ ENSMUSG00225023541
 pseudogene Chr18:87661968-87662445 (-)
PWK/PhJ ENSLUMG00010004202
 pseudogene Chr18:85921736-85922213 (-)
SPRET/EiJ ENSMSPG00010001389
 pseudogene Chr18:86419252-86419729 (-)
WSB/EiJ ENSIUOG00005016349
 pseudogene Chr18:85155334-85155811 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000117830 Ensembl Gene Model | MGI Sequence Detail 478 C57BL/6J ±  kb
transcript ENSMUST00000235625 Ensembl | MGI Sequence Detail 478 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory