Gm50382 Pseudogene Detail

Summary

• Symbol
  Gm50382
• Name
  predicted gene, 50382

• Feature Type
  pseudogene
• IDs
  MGI:6303281
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:5059413-5059827 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303281	pseudogene	Chr19:5059413-5059827 (+)
129S1/SvImJ	ENSMUSG00200053494	pseudogene	Chr19:1819774-1820188 (+)
A/J	ENSMUSG00195053067	pseudogene	Chr19:2215289-2215703 (+)
AKR/J	ENSMUSG00220050231	pseudogene	Chr19:1988374-1988788 (+)
BALB/cJ	ENSMUSG00180052584	pseudogene	Chr19:2590013-2590427 (+)
C3H/HeJ	ENSMUSG00175015137	pseudogene	Chr19:1834740-1835154 (+)
C57BL/6NJ	ENSMUSG00215047547	pseudogene	Chr19:2057945-2058359 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044099	pseudogene	Chr19:1978651-1979065 (+)
CBA/J	ENSMUSG00210050378	pseudogene	Chr19:1838572-1838986 (+)
DBA/2J	ENSMUSG00185052427	pseudogene	Chr19:2215049-2215463 (+)
FVB/NJ	ENSMUSG00205052477	pseudogene	Chr19:2218218-2218632 (+)
JF1/MsJ	ENSUMUG00000056315	pseudogene	Chr19:2197435-2197849 (+)
LP/J	ENSMUSG00230054321	pseudogene	Chr19:3126723-3127137 (+)
NOD/ShiLtJ	ENSMUSG00190052704	pseudogene	Chr19:1749786-1750200 (+)
NZO/HlLtJ	ENSMUSG00225026897	pseudogene	Chr19:6835472-6835886 (+)
PWK/PhJ	ENSLUMG00010008953	pseudogene	Chr19:1970285-1970699 (+)
SPRET/EiJ	ENSMSPG00010050937	pseudogene	Chr19:1959723-1959970 (+)
WSB/EiJ	ENSIUOG00005051229	pseudogene	Chr19:1849743-1850157 (+)

Homology

• Gene Tree
  Gm50382
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117723 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117723	Ensembl Gene Model | MGI Sequence Detail	415	C57BL/6J
transcript	ENSMUST00000235939	Ensembl | MGI Sequence Detail	415	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;