Gm50376 Gene Detail

Summary

• Symbol
  Gm50376
• Name
  predicted gene, 50376

• Feature Type
  lncRNA gene
• IDs
  MGI:6303272
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:26223418-26227330 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  218 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303272	lncRNA gene	Chr19:26223418-26227330 (-)
129S1/SvImJ	ENSMUSG00200020743	lncRNA gene	Chr19:22944494-22948453 (-)
A/J	ENSMUSG00195035539	lncRNA gene	Chr19:23105977-23109883 (-)
AKR/J	ENSMUSG00220019686	lncRNA gene	Chr19:23146608-23150514 (-)
BALB/cJ	ENSMUSG00180013931	lncRNA gene	Chr19:23438688-23442594 (-)
C3H/HeJ	ENSMUSG00175026182	lncRNA gene	Chr19:22812241-22816147 (-)
C57BL/6NJ	ENSMUSG00215028842	lncRNA gene	Chr19:22851908-22855814 (-)
C57BL/6NJ	ENSMUSG00215032156	lncRNA gene	Chr19:22836765-22840655 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018289	lncRNA gene	Chr19:22668394-22672298 (-)
CBA/J	ENSMUSG00210015018	lncRNA gene	Chr19:23043229-23047135 (-)
DBA/2J	ENSMUSG00185026350	lncRNA gene	Chr19:23429887-23433793 (-)
FVB/NJ	ENSMUSG00205014444	lncRNA gene	Chr19:22805186-22809141 (-)
JF1/MsJ	ENSUMUG00000037547	lncRNA gene	Chr19:23638176-23642119 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190022313	lncRNA gene	Chr19:22809665-22813571 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010035581	lncRNA gene	Chr19:22981862-22985818 (-)
SPRET/EiJ	ENSMSPG00010036245	lncRNA gene	Chr19:22952092-22956020 (-)
WSB/EiJ	ENSIUOG00005028980	lncRNA gene	Chr19:22532833-22536739 (-)

Homology

• Gene Tree
  Gm50376
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117950 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117950	Ensembl Gene Model | MGI Sequence Detail	3913	C57BL/6J
transcript	ENSMUST00000330981	Ensembl | MGI Sequence Detail	1351	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;