Gm50373 Gene Detail

Summary

• Symbol
  Gm50373
• Name
  predicted gene, 50373

• Feature Type
  lncRNA gene
• IDs
  MGI:6303267
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr19:29784055-29787563 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303267	lncRNA gene	Chr19:29784055-29787563 (+)
129S1/SvImJ	ENSMUSG00200021137	lncRNA gene	Chr19:26520657-26524090 (+)
A/J	ENSMUSG00195037144	lncRNA gene	Chr19:26675475-26678908 (+)
AKR/J	ENSMUSG00220020196	lncRNA gene	Chr19:26734866-26738299 (+)
BALB/cJ	ENSMUSG00180013607	lncRNA gene	Chr19:27004278-27007711 (+)
C3H/HeJ	ENSMUSG00175025576	lncRNA gene	Chr19:26380334-26383767 (+)
C57BL/6NJ	ENSMUSG00215030502	lncRNA gene	Chr19:26420779-26424212 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018496	lncRNA gene	Chr19:26243902-26247326 (+)
CBA/J	ENSMUSG00210015051	lncRNA gene	Chr19:26611282-26614715 (+)
DBA/2J	ENSMUSG00185025982	lncRNA gene	Chr19:26998040-27001473 (+)
FVB/NJ	ENSMUSG00205013298	lncRNA gene	Chr19:26392143-26395576 (+)
JF1/MsJ	ENSUMUG00000038174	lncRNA gene	Chr19:27213450-27216862 (+)
LP/J	ENSMUSG00230028937	lncRNA gene	Chr19:27814293-27817726 (+)
NOD/ShiLtJ	ENSMUSG00190022622	lncRNA gene	Chr19:26374834-26378267 (+)
NZO/HlLtJ	ENSMUSG00225029905	lncRNA gene	Chr19:31567588-31571021 (+)
PWK/PhJ	ENSLUMG00010036470	lncRNA gene	Chr19:26600135-26603550 (+)
SPRET/EiJ	ENSMSPG00010038647	lncRNA gene	Chr19:26549950-26553350 (+)
WSB/EiJ	ENSIUOG00005028623	lncRNA gene	Chr19:26097684-26101117 (+)

Homology

• Gene Tree
  Gm50373
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  4
• Targeted
  4
• Genomic Mutations
  4 involving Gm50373
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118251 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118251	Ensembl Gene Model | MGI Sequence Detail	3509	C57BL/6J
transcript	ENSMUST00000236200	Ensembl | MGI Sequence Detail	324	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:360836 Kambali M, et al., An increased copy number of glycine decarboxylase (GLDC) associated with psychosis reduces extracellular glycine and impairs NMDA receptor function. Mol Psychiatry. 2025 Mar;30(3):927-942

TSS for Gm50373:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr155910	Chr19:29782669-29782693 (+)	-1,374 bp
Tssr5475	Chr19:29783580-29783607 (+)	-461 bp