Gm50372 Pseudogene Detail

Summary

• Symbol
  Gm50372
• Name
  predicted gene, 50372

• Feature Type
  pseudogene
• IDs
  MGI:6303266
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:4730143-4730644 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303266	pseudogene	Chr19:4730143-4730644 (+)
129S1/SvImJ	ENSMUSG00200052460	pseudogene	Chr19:1490739-1491240 (+)
A/J	ENSMUSG00195053032	pseudogene	Chr19:1881724-1882225 (+)
AKR/J	ENSMUSG00220050525	pseudogene	Chr19:1654685-1655186 (+)
BALB/cJ	ENSMUSG00180052427	pseudogene	Chr19:2256356-2256857 (+)
C3H/HeJ	ENSMUSG00175014075	pseudogene	Chr19:1501104-1501605 (+)
C57BL/6NJ	ENSMUSG00215048788	pseudogene	Chr19:1729113-1729614 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043849	pseudogene	Chr19:1645300-1645822 (+)
CBA/J	ENSMUSG00210050770	pseudogene	Chr19:1501447-1501948 (+)
DBA/2J	ENSMUSG00185052257	pseudogene	Chr19:1877771-1878272 (+)
FVB/NJ	ENSMUSG00205052878	pseudogene	Chr19:1879524-1880025 (+)
JF1/MsJ	ENSUMUG00000056643	pseudogene	Chr19:1858548-1859049 (+)
LP/J	ENSMUSG00230054245	pseudogene	Chr19:2796812-2797313 (+)
NOD/ShiLtJ	ENSMUSG00190052093	pseudogene	Chr19:1422648-1423149 (+)
NZO/HlLtJ	ENSMUSG00225027219	pseudogene	Chr19:6505722-6506223 (+)
PWK/PhJ	ENSLUMG00010008098	pseudogene	Chr19:1635411-1635912 (+)
SPRET/EiJ	ENSMSPG00010050728	pseudogene	Chr19:1624814-1625314 (+)
WSB/EiJ	ENSIUOG00005051692	pseudogene	Chr19:1513483-1513984 (+)

Homology

• Gene Tree
  Gm50372
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117746 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117746	Ensembl Gene Model | MGI Sequence Detail	502	C57BL/6J
transcript	ENSMUST00000236726	Ensembl | MGI Sequence Detail	502	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;