Gm50359 Pseudogene Detail

Summary

• Symbol
  Gm50359
• Name
  predicted gene, 50359

• Feature Type
  pseudogene
• IDs
  MGI:6303246
  NCBI Gene: 115489042
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:10153218-10153525 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303246	pseudogene	Chr19:10151129-10157868 (-)
129S1/SvImJ	ENSMUSG00200053342	pseudogene	Chr19:6832056-6832363 (-)
A/J	ENSMUSG00195053500	pseudogene	Chr19:7042986-7043291 (-)
AKR/J	ENSMUSG00220050927	pseudogene	Chr19:6952631-6952938 (-)
BALB/cJ	ENSMUSG00180052476	pseudogene	Chr19:7406979-7407284 (-)
C3H/HeJ	ENSMUSG00175015433	pseudogene	Chr19:6680646-6680951 (-)
C57BL/6NJ	ENSMUSG00215048042	pseudogene	Chr19:6749375-6749682 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044605	pseudogene	Chr19:6547915-6548222 (-)
CBA/J	ENSMUSG00210050826	pseudogene	Chr19:6879232-6879537 (-)
DBA/2J	ENSMUSG00185052717	pseudogene	Chr19:7288962-7289267 (-)
FVB/NJ	ENSMUSG00205053083	pseudogene	Chr19:6771398-6771705 (-)
JF1/MsJ	ENSUMUG00000056430	pseudogene	Chr19:7408992-7409299 (-)
LP/J	ENSMUSG00230054342	pseudogene	Chr19:8206765-8207072 (-)
NOD/ShiLtJ	ENSMUSG00190052973	pseudogene	Chr19:6505307-6505614 (-)
NZO/HlLtJ	ENSMUSG00225046643	pseudogene	Chr19:11915598-11915905 (-)
PWK/PhJ	ENSLUMG00010009339	pseudogene	Chr19:6794547-6794854 (-)
SPRET/EiJ	ENSMSPG00010051188	pseudogene	Chr19:6637503-6637803 (-)
WSB/EiJ	ENSIUOG00005050885	pseudogene	Chr19:6397367-6397672 (-)

Homology

• Gene Tree
  Gm50359
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm50359
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000117700 (Evidence)
• NCBI Gene
  115489042

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117700	Ensembl Gene Model | MGI Sequence Detail	308	C57BL/6J
transcript	ENSMUST00000235345	Ensembl | MGI Sequence Detail	308	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:336597 Yamamoto H, et al., GWAS-identified bipolar disorder risk allele in the FADS1/2 gene region links mood episodes and unsaturated fatty acid metabolism in mutant mice. Mol Psychiatry. 2023 Jul;28(7):2848-2856