Gm50357 Pseudogene Detail

Summary

• Symbol
  Gm50357
• Name
  predicted gene, 50357

• Feature Type
  pseudogene
• IDs
  MGI:6303243
  NCBI Gene: 112577501
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:61245972-61246227 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  28 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303243	pseudogene	Chr19:61245314-61246460 (-)
129S1/SvImJ	ENSMUSG00200015099	pseudogene	Chr19:57940971-57941226 (-)
A/J	ENSMUSG00195002559	pseudogene	Chr19:58119631-58119886 (-)
AKR/J	ENSMUSG00220017917	pseudogene	Chr19:57873289-57873544 (-)
BALB/cJ	ENSMUSG00180020399	pseudogene	Chr19:58363879-58364134 (-)
C3H/HeJ	ENSMUSG00175022362	pseudogene	Chr19:57904786-57905041 (-)
C57BL/6NJ	ENSMUSG00215025847	pseudogene	Chr19:57982680-57982935 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015560	pseudogene	Chr19:57536769-57537024 (-)
CBA/J	ENSMUSG00210021372	pseudogene	Chr19:57984738-57984993 (-)
DBA/2J	ENSMUSG00185028447	pseudogene	Chr19:58480668-58480923 (-)
FVB/NJ	ENSMUSG00205003607	pseudogene	Chr19:57368274-57368529 (-)
JF1/MsJ	ENSUMUG00000040065	pseudogene	Chr19:58681435-58681690 (-)
LP/J	ENSMUSG00230028268	pseudogene	Chr19:59223249-59223504 (-)
NOD/ShiLtJ	ENSMUSG00190013444	pseudogene	Chr19:57906418-57906673 (-)
NZO/HlLtJ	ENSMUSG00225021201	pseudogene	Chr19:62851166-62851421 (-)
PWK/PhJ	ENSLUMG00010019053	pseudogene	Chr19:57673643-57673898 (-)
SPRET/EiJ	ENSMSPG00010038931	pseudogene	Chr10:129004392-129004684 (-)
WSB/EiJ	ENSIUOG00005026018	pseudogene	Chr19:57325170-57325425 (-)

Homology

• Gene Tree
  Gm50357
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117951 (Evidence)
• NCBI Gene
  112577501

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117951	Ensembl Gene Model | MGI Sequence Detail	256	C57BL/6J
transcript	ENSMUST00000237978	Ensembl | MGI Sequence Detail	256	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;