Gm50356 Gene Detail

Summary

• Symbol
  Gm50356
• Name
  predicted gene, 50356

• Feature Type
  lncRNA gene
• IDs
  MGI:6303241
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:82776807-82805140 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1052 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6303241	lncRNA gene	Chr18:82776807-82805140 (+)
129S1/SvImJ	ENSMUSG00200029842	lncRNA gene	Chr18:79987877-79991560 (+)
A/J	ENSMUSG00195005019	lncRNA gene	Chr18:80085642-80089329 (+)
AKR/J	ENSMUSG00220017373	lncRNA gene	Chr18:80005181-80008874 (+)
BALB/cJ	ENSMUSG00180013718	lncRNA gene	Chr18:80652363-80656052 (+)
C3H/HeJ	ENSMUSG00175012932	lncRNA gene	Chr18:80192579-80196266 (+)
C57BL/6NJ	ENSMUSG00215027636	lncRNA gene	Chr18:79571514-79575199 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029982	lncRNA gene	Chr18:79103928-79107677 (+)
CBA/J	ENSMUSG00210035474	lncRNA gene	Chr18:80143062-80146751 (+)
DBA/2J	ENSMUSG00185011994	lncRNA gene	Chr18:80048367-80052048 (+)
FVB/NJ	ENSMUSG00205018194	lncRNA gene	Chr18:79456402-79460103 (+)
JF1/MsJ	ENSUMUG00000034002	lncRNA gene	Chr18:79937936-79941669 (+)
LP/J	ENSMUSG00230018597	lncRNA gene	Chr18:82090056-82093737 (+)
NOD/ShiLtJ	ENSMUSG00190025235	lncRNA gene	Chr18:79873445-79877130 (+)
NZO/HlLtJ	ENSMUSG00225023636	lncRNA gene	Chr18:81973406-81977093 (+)
PWK/PhJ	ENSLUMG00010007076	lncRNA gene	Chr18:80333442-80337148 (+)
SPRET/EiJ	ENSMSPG00010009274	lncRNA gene	Chr18:80694266-80698042 (+)
WSB/EiJ	ENSIUOG00005008454	lncRNA gene	Chr18:79505942-79509625 (+)

Homology

• Gene Tree
  Gm50356
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  50

• Ensembl
  ENSMUSG00000118085 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118085	Ensembl Gene Model | MGI Sequence Detail	28334	C57BL/6J
transcript	ENSMUST00000236831	Ensembl | MGI Sequence Detail	1414	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;